# This file is an EasyBuild reciPY as per https://github.com/easybuilders/easybuild
# Author: Pablo Escobar Lopez
# Swiss Institute of Bioinformatics
# Biozentrum - University of Basel

name = 'Trinity'
version = '2.0.4'

homepage = 'http://trinityrnaseq.github.io/'
description = """Trinity represents a novel method for the efficient and robust de novo reconstruction
 of transcriptomes from RNA-Seq data. Trinity combines three independent software modules: Inchworm,
 Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-Seq reads."""

toolchain = {'name': 'goolf', 'version': '1.4.10'}

source_urls = ['https://github.com/trinityrnaseq/trinityrnaseq/archive/']
sources = ['v%(version)s.tar.gz']

patches = ['Trinity-%(version)s_plugins-Makefile.patch']

dependencies = [
    ('Java', '1.7.0_80', '', True),
    ('ant', '1.9.6', '-Java-%(javaver)s', True),
    ('ncurses', '5.9'),
    ('zlib', '1.2.8'),
]

moduleclass = 'bio'
