# Source code for nes.methods.cell_measures

    #!/usr/bin/env python
    from numpy import empty, newaxis, array, arcsin, tan, fabs, arctan, sqrt, radians, cos, sin, column_stack
    from copy import deepcopy

    def calculate_grid_area(self):
        """
        Get coordinate bounds and call function to calculate the area of each cell of a grid.

        Parameters
        ----------
        self : nes.Nes
            Source projection Nes Object.
        """

        # Create bounds if they do not exist
        if self.lat_bnds is None or self.lon_bnds is None:
            self.create_spatial_bounds()

        # Get spatial number of vertices
        spatial_nv = self.lat_bnds["data"].shape[-1]

        # Reshape bounds
        if spatial_nv == 2:

            aux_shape = (self.lat_bnds["data"].shape[0], self.lon_bnds["data"].shape[0], 4)
            lon_bnds_aux = empty(aux_shape)
            lon_bnds_aux[:, :, 0] = self.lon_bnds["data"][newaxis, :, 0]
            lon_bnds_aux[:, :, 1] = self.lon_bnds["data"][newaxis, :, 1]
            lon_bnds_aux[:, :, 2] = self.lon_bnds["data"][newaxis, :, 1]
            lon_bnds_aux[:, :, 3] = self.lon_bnds["data"][newaxis, :, 0]

            lon_bnds = lon_bnds_aux
            del lon_bnds_aux

            lat_bnds_aux = empty(aux_shape)
            lat_bnds_aux[:, :, 0] = self.lat_bnds["data"][:, newaxis, 0]
            lat_bnds_aux[:, :, 1] = self.lat_bnds["data"][:, newaxis, 0]
            lat_bnds_aux[:, :, 2] = self.lat_bnds["data"][:, newaxis, 1]
            lat_bnds_aux[:, :, 3] = self.lat_bnds["data"][:, newaxis, 1]

            lat_bnds = lat_bnds_aux
            del lat_bnds_aux

        else:
            lon_bnds = self.lon_bnds["data"]
            lat_bnds = self.lat_bnds["data"]

        # Reshape bounds and assign as grid corner coordinates
        grid_corner_lon = deepcopy(lon_bnds).reshape(lon_bnds.shape[0]*lon_bnds.shape[1],
                                                     lon_bnds.shape[2])
        grid_corner_lat = deepcopy(lat_bnds).reshape(lat_bnds.shape[0]*lat_bnds.shape[1],
                                                     lat_bnds.shape[2])

        # Calculate cell areas
        grid_area = calculate_cell_area(grid_corner_lon, grid_corner_lat,
                                        earth_radius_minor_axis=self.earth_radius[0],
                                        earth_radius_major_axis=self.earth_radius[1])

        return grid_area

    def calculate_geometry_area(geometry_list, earth_radius_minor_axis=6356752.3142,
                                earth_radius_major_axis=6378137.0):
        """
        Get coordinate bounds and call function to calculate the area of each cell of a set of geometries.

        Parameters
        ----------
        geometry_list : List
            A List with polygon geometries.
        earth_radius_minor_axis : float
            Radius of the minor axis of the Earth.
        earth_radius_major_axis : float
            Radius of the major axis of the Earth.
        """

        geometry_area = empty(shape=(len(geometry_list,)))

        for geom_ind in range(0, len(geometry_list)):

            # Calculate the area of each geometry in multipolygon and collection objects
            if geometry_list[geom_ind].geom_type in ["MultiPolygon", "GeometryCollection"]:
                multi_geom_area = 0
                for multi_geom_ind in range(0, len(geometry_list[geom_ind].geoms)):
                    if geometry_list[geom_ind].geoms[multi_geom_ind].geom_type == "Point":
                        continue
                    geometry_corner_lon, geometry_corner_lat = (
                        geometry_list[geom_ind].geoms[multi_geom_ind].exterior.coords.xy)
                    geometry_corner_lon = array(geometry_corner_lon)
                    geometry_corner_lat = array(geometry_corner_lat)
                    geom_area = __mod_huiliers_area(geometry_corner_lon, geometry_corner_lat)
                    multi_geom_area += geom_area
                geometry_area[geom_ind] = multi_geom_area * earth_radius_minor_axis * earth_radius_major_axis

            # Calculate the area of each geometry
            else:
                geometry_corner_lon, geometry_corner_lat = geometry_list[geom_ind].exterior.coords.xy
                geometry_corner_lon = array(geometry_corner_lon)
                geometry_corner_lat = array(geometry_corner_lat)
                geom_area = __mod_huiliers_area(geometry_corner_lon, geometry_corner_lat)
                geometry_area[geom_ind] = geom_area * earth_radius_minor_axis * earth_radius_major_axis

        return geometry_area

    def calculate_cell_area(grid_corner_lon, grid_corner_lat,
                            earth_radius_minor_axis=6356752.3142, earth_radius_major_axis=6378137.0):
        """
        Calculate the area of each cell of a grid.

        Parameters
        ----------
        grid_corner_lon : array
            An Array with longitude bounds of grid.
        grid_corner_lat : array
            An Array with longitude bounds of grid.
        earth_radius_minor_axis : float
            Radius of the minor axis of the Earth.
        earth_radius_major_axis : float
            Radius of the major axis of the Earth.
        """

        # Calculate area for each grid cell
        n_cells = grid_corner_lon.shape[0]
        area = empty(shape=(n_cells,))
        for i in range(0, n_cells):
            area[i] = __mod_huiliers_area(grid_corner_lon[i], grid_corner_lat[i])

        return area*earth_radius_minor_axis*earth_radius_major_axis

    def __mod_huiliers_area(cell_corner_lon, cell_corner_lat):
        """
        Calculate the area of each cell according to Huilier's theorem.
        Reference: CDO (https://earth.bsc.es/gitlab/ces/cdo/).

        Parameters
        ----------
        cell_corner_lon : array
            Longitude boundaries of each cell.
        cell_corner_lat : array
            Latitude boundaries of each cell.
        """

        my_sum = 0

        # Get points 0 (bottom left) and 1 (bottom right) in Earth coordinates
        point_0 = __lon_lat_to_cartesian(cell_corner_lon[0], cell_corner_lat[0], earth_radius_major_axis=1)
        point_1 = __lon_lat_to_cartesian(cell_corner_lon[1], cell_corner_lat[1], earth_radius_major_axis=1)
        point_0, point_1 = point_0[0], point_1[0]

        # Get number of vertices
        if cell_corner_lat[0] == cell_corner_lat[-1]:
            spatial_nv = len(cell_corner_lon) - 1
        else:
            spatial_nv = len(cell_corner_lon)

        for i in range(2, spatial_nv):

            # Get point 2 (top right) in Earth coordinates
            point_2 = __lon_lat_to_cartesian(cell_corner_lon[i], cell_corner_lat[i], earth_radius_major_axis=1)
            point_2 = point_2[0]

            # Calculate area of triangle between points 0, 1 and 2
            my_sum += __tri_area(point_0, point_1, point_2)

            # Copy to calculate area of next triangle
            if i == (spatial_nv - 1):
                point_1 = deepcopy(point_2)

        return my_sum

    def __tri_area(point_0, point_1, point_2):
        """
        Calculate area between three points that form a triangle.
        Reference: CDO (https://earth.bsc.es/gitlab/ces/cdo/).

        Parameters
        ----------
        point_0 : array
            Position of first point in cartesian coordinates.
        point_1 : array
            Position of second point in cartesian coordinates.
        point_2 : array
            Position of third point in cartesian coordinates.
        """

        # Get length of side a (between point 0 and 1)
        tmp_vec = __cross_product(point_0, point_1)
        sin_a = __norm(tmp_vec)
        a = arcsin(sin_a)

        # Get length of side b (between point 0 and 2)
        tmp_vec = __cross_product(point_0, point_2)
        sin_b = __norm(tmp_vec)
        b = arcsin(sin_b)

        # Get length of side c (between point 1 and 2)
        tmp_vec = __cross_product(point_2, point_1)
        sin_c = __norm(tmp_vec)
        c = arcsin(sin_c)

        # Calculate area
        s = 0.5*(a+b+c)
        t = tan(s*0.5) * tan((s - a)*0.5) * tan((s - b)*0.5) * tan((s - c)*0.5)
        area = fabs(4.0 * arctan(sqrt(fabs(t))))

        return area

    def __cross_product(a, b):
        """
        Calculate cross product between two points.

        Parameters
        ----------
        a : array
            Position of point A in cartesian coordinates.
        b : array
            Position of point B in cartesian coordinates.
        """

        return [a[1]*b[2] - a[2]*b[1],
                a[2]*b[0] - a[0]*b[2],
                a[0]*b[1] - a[1]*b[0]]

    def __norm(cp):
        """
        Normalize the result of the cross product operation.

        Parameters
        ----------
        cp : array
            Cross product between two points.
        """

        return sqrt(cp[0]*cp[0] + cp[1]*cp[1] + cp[2]*cp[2])

    # noinspection DuplicatedCode
    def __lon_lat_to_cartesian(lon, lat, earth_radius_major_axis=6378137.0):
        """
        Calculate lon, lat coordinates of a point on a sphere.

        Parameters
        ----------
        lon : array
            Longitude values.
        lat : array
            Latitude values.
        earth_radius_major_axis : float
            Radius of the major axis of the Earth.
        """

        lon_r = radians(lon)
        lat_r = radians(lat)

        x = earth_radius_major_axis * cos(lat_r) * cos(lon_r)
        y = earth_radius_major_axis * cos(lat_r) * sin(lon_r)
        z = earth_radius_major_axis * sin(lat_r)

        return column_stack([x, y, z])