Newer
Older
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
# coding=utf-8
from earthdiagnostics.diagnostic import Diagnostic
class Relink(Diagnostic):
"""
Recreates the links for the variable specified
:original author: Javier Vegas-Regidor<javier.vegas@bsc.es>
:created: September 2016
:param data_manager: data management object
:type data_manager: DataManager
:param startdate: startdate
:type startdate: str
:param member: member number
:type member: int
:param chunk: chunk's number
:type chunk: int
:param variable: variable's name
:type variable: str
:param domain: variable's domain
:type domain: str
"""
alias = 'relink'
"Diagnostic alias for the configuration file"
def __init__(self, data_manager, startdate, member, chunk, domain, variable):
Diagnostic.__init__(self, data_manager)
self.startdate = startdate
self.member = member
self.chunk = chunk
self.variable = variable
self.domain = domain
def __str__(self):
return 'Relink output Startdate: {0} Member: {1} Chunk: {2} ' \
'Variable: {3}:{4}'.format(self.startdate, self.member, self.chunk, self.domain, self.variable)
def __eq__(self, other):
return self.startdate == other.startdate and self.member == other.member and self.chunk == other.chunk and \
self.domain == other.domain and self.variable == other.variable
@classmethod
def generate_jobs(cls, diags, options):
"""
Creates a job for each chunk to compute the diagnostic
:param diags: Diagnostics manager class
:type diags: Diags
:param options: variable, domain
:type options: list[str]
:return:
"""
num_options = len(options) - 1
if num_options < 2:
raise Exception('You must specify the variable and domain to link')
if num_options > 2:
raise Exception('You must specify 2 parameters for the relink diagnostic')
variable = options[1]
domain = options[2]
job_list = list()
for startdate, member, chunk in diags.config.experiment.get_chunk_list():
job_list.append(Relink(diags.data_manager, startdate, member, chunk, domain, variable))
return job_list
def compute(self):
"""
Runs the diagnostic
"""
self.data_manager.link_file(self.domain, self.variable, self.startdate, self.member, self.chunk)