# coding=utf-8 from earthdiagnostics.constants import Basins from earthdiagnostics.diagnostic import Diagnostic from earthdiagnostics.utils import Utils, TempFile import numpy as np class InterpolateCDO(Diagnostic): """ 3-dimensional conservative interpolation to the regular atmospheric grid. It can also be used for 2D (i,j) variables :original author: Javier Vegas-Regidor :created: October 2016 :param data_manager: data management object :type data_manager: DataManager :param startdate: startdate :type startdate: str :param member: member number :type member: int :param chunk: chunk's number :type chunk: int :param variable: variable's name :type variable: str :param domain: variable's domain :type domain: str :param model_version: model version :type model_version: str """ alias = 'interpcdo' "Diagnostic alias for the configuration file" def __init__(self, data_manager, startdate, member, chunk, domain, variable, target_grid, model_version): Diagnostic.__init__(self, data_manager) self.startdate = startdate self.member = member self.chunk = chunk self.variable = variable self.domain = domain self.model_version = model_version self.required_vars = [variable] self.generated_vars = [variable] self.tempTemplate = '' self.grid = target_grid def __eq__(self, other): return self.startdate == other.startdate and self.member == other.member and self.chunk == other.chunk and \ self.model_version == other.model_version and self.domain == other.domain and \ self.variable == other.variable and self.grid == other.grid def __str__(self): return 'Interpolate Startdate: {0} Member: {1} Chunk: {2} ' \ 'Variable: {3}:{4} Target grid: {5} ' \ 'Model: {6}' .format(self.startdate, self.member, self.chunk, self.domain, self.variable, self.grid, self.model_version) @classmethod def generate_jobs(cls, diags, options): """ Creates a job for each chunk to compute the diagnostic :param diags: Diagnostics manager class :type diags: Diags :param options: target_grid, variable, domain=ocean :type options: list[str] :return: """ num_options = len(options) - 1 if num_options < 1: raise Exception('You must specify the variable to interpolate') if num_options > 3: raise Exception('You must specify between 1 and 3 parameters for the interpolation with CDO diagnostic') variable = options[1] if num_options >= 3: target_grid = options[2] else: target_grid = diags.config.experiment.atmos_grid.lower() target_grid = cls._translate_ifs_grids_to_cdo_names(target_grid) if num_options >= 3: domain = options[3] else: domain = 'ocean' job_list = list() for startdate, member, chunk in diags.config.experiment.get_chunk_list(): job_list.append( InterpolateCDO(diags.data_manager, startdate, member, chunk, domain, variable, target_grid, diags.config.experiment.model_version)) return job_list @classmethod def _translate_ifs_grids_to_cdo_names(cls, target_grid): if target_grid.startswith('T159L'): target_grid = 't106' if target_grid.startswith('T255L'): target_grid = 't170' if target_grid.startswith('T511L'): target_grid = 't340' return target_grid def compute(self): """ Runs the diagnostic """ variable_file = self.data_manager.get_file(self.domain, self.variable, self.startdate, self.member, self.chunk) handler = Utils.openCdf(variable_file) var = handler.variables[self.variable] mask = Utils.get_mask(Basins.Global).astype(float) mask[mask == 0] = np.nan var[:] = mask * var[:] handler.close() cdo = Utils.cdo temp = TempFile.get() cdo.remapbil(self.grid, input=variable_file, output=temp) Utils.setminmax(temp, self.variable) self.send_file(temp, self.domain, self.variable, self.startdate, self.member, self.chunk, grid=self.grid)