# coding=utf-8 from earthdiagnostics.diagnostic import Diagnostic, DiagnosticVariableOption, \ DiagnosticDomainOption, DiagnosticChoiceOption, DiagnosticOption from earthdiagnostics.utils import Utils import numpy as np class MaskLand(Diagnostic): """ Changes values present in the mask for NaNs :created: February 2012 :last modified: June 2016 :param data_manager: data management object :type data_manager: DataManager :param startdate: startdate :type startdate: str :param member: member number :type member: int :param chunk: chunk's number :type chunk: int :param variable: variable to average :type variable: str """ alias = 'maskland' "Diagnostic alias for the configuration file" def __init__(self, data_manager, startdate, member, chunk, domain, variable, mask, grid): Diagnostic.__init__(self, data_manager) self.startdate = startdate self.member = member self.chunk = chunk self.domain = domain self.variable = variable self.mask = mask self.grid = grid def __eq__(self, other): return self.startdate == other.startdate and self.member == other.member and self.chunk == other.chunk and \ self.domain == other.domain and self.variable == other.variable def __str__(self): return 'Land mask Startdate: {0} Member: {1} Chunk: {2} Variable: {3}:{4} ' \ 'Grid: {5}'.format(self.startdate, self.member, self.chunk, self.domain, self.variable, self.grid) @classmethod def generate_jobs(cls, diags, options): """ Creates a job for each chunk to compute the diagnostic :param diags: Diagnostics manager class :type diags: Diags :param options: variable, minimum depth (level), maximum depth (level) :type options: list[str] :return: """ options_available = (DiagnosticDomainOption('domain'), DiagnosticVariableOption('variable'), DiagnosticChoiceOption('cell', ('t', 'u', 'v'), 't'), DiagnosticOption('grid', '')) options = cls.process_options(options, options_available) mask_file = Utils.openCdf('mask.nc') mask = mask_file.variables['{0}mask'.format(options['cell'])][:].astype(float) mask[mask == 0] = np.nan job_list = list() for startdate, member, chunk in diags.config.experiment.get_chunk_list(): job_list.append(MaskLand(diags.data_manager, startdate, member, chunk, options['domain'], options['variable'], mask, options['grid'])) return job_list def compute(self): """ Runs the diagnostic """ variable_file = self.data_manager.get_file(self.domain, self.variable, self.startdate, self.member, self.chunk, grid=self.grid) handler = Utils.openCdf(variable_file) if not 'lev' in handler.dimensions: mask = self.mask[:, 0, ...] else: mask =self.mask handler.variables[self.variable][:] *= mask handler.close() self.send_file(variable_file, self.domain, self.variable, self.startdate, self.member, self.chunk, grid=self.grid)