#!/usr/bin/env bash #SBATCH -n 2 #SBATCH --time 72:00:00 #SBATCH --error=job.%J.err #SBATCH --output=job.%J.out set -xv PATH_TO_DIAGNOSTICS=~/pyCharm/ocean_diagnostics PATH_TO_VIRTUALENV=/home/Earth/jvegas/virtualenvs/diags/bin module purge module load NCO/4.5.4-foss-2015a module load CDO/1.6.9-foss-2015a module load netCDF-Fortran/4.2-foss-2015a source ${PATH_TO_VIRTUALENV}/activate export PYTHONPATH=${PATH_TO_DIAGNOSTICS}:${PYTHONPATH} cd ${PATH_TO_DIAGNOSTICS}/earthdiagnostics/ ./diags.py -lc DEBUG