diff --git a/inst/doc/usecase/ex1_12_rotated_coordinates.R b/inst/doc/usecase/ex1_12_rotated_coordinates.R index 3da4b794a376c71de0e6848e927b78e7824cf86e..f657a70418aead4f1bc7770e430f4a887f37b03a 100644 --- a/inst/doc/usecase/ex1_12_rotated_coordinates.R +++ b/inst/doc/usecase/ex1_12_rotated_coordinates.R @@ -5,11 +5,11 @@ #------------------------------- library(startR) -obs_path <- '/esarchive/exp/monarch-dustclim/3hourly/$var$/$var$_$date$03_av_an.nc' +path <- '/esarchive/oper/thredds-dust/monarch-dustclim/3hourly/$var$-av_an/$var$_$date$03_av_an.nc' date <- c('20131229', '20131230') # two temporal dimensions: one for days and another four hours -data_split <- Start(dataset = obs_path, +data_split <- Start(dataset = path, var = 'od550du', lev = 'all', date = date, @@ -21,7 +21,7 @@ data_split <- Start(dataset = obs_path, lat = NULL, lon = NULL), retrieve = TRUE, num_procs = 1) # one temporal dimension -data <- Start(dataset = obs_path, +data <- Start(dataset = path, var = 'od550du', lev = 'all', date = date, @@ -48,7 +48,7 @@ attributes(data)$Variables$common$time # PLOT: -map <- data[1,1,1,1,1,,] # Time-step 1 +map <- data[1,1,1,1,,] # Time-step 1 library(sf) library(ggplot2) map <- data.frame(rlat = rep(rlat, length(rlon)), diff --git a/inst/doc/usecase/ex2_1_timedim.R b/inst/doc/usecase/ex2_1_timedim.R index f06b766dd1fff0db1ef3a02b0c1005ad376e2752..f8253c85162db28d4471e56c47d1da855de42861 100644 --- a/inst/doc/usecase/ex2_1_timedim.R +++ b/inst/doc/usecase/ex2_1_timedim.R @@ -13,16 +13,14 @@ library(startR) return_vars = list(latitude = 'dat', longitude = 'dat', time = 'sdate'), retrieve = FALSE) - library(multiApply) fun_spring <- function(x) { - source("/esarchive/scratch/nperez/Season_v2.R") - y <- Season_v2(x, monini = 1, moninf = 3, monsup = 5) + y <- s2dv::Season(x, time_dim = 'time', monini = 1, moninf = 3, monsup = 5) return(y) } step1 <- Step(fun = fun_spring, - target_dims = c('time'), - output_dims = c('time')) + target_dims = c('var', 'time'), + output_dims = c('var', 'time')) wf1 <- AddStep(data, step1)