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Update Autosubmit authored by vagudets's avatar vagudets
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Autosubmit.md
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......@@ -28,11 +28,11 @@ Run:
Terminal: yes
filesystem: esarchive
output_dir: /esarchive/scratch/vagudets/auto-s2s-outputs/ # replace with the directory where you want to save the outputs
code_dir: /esarchive/scratch/vagudets/repos/auto-s2s/ # replace with the directory where your code is
code_dir: /esarchive/scratch/vagudets/repos/sunset/ # replace with the directory where your code is
autosubmit: yes
# fill only if using autosubmit
auto_conf:
script: /esarchive/scratch/vagudets/repos/auto-s2s/modules/test_parallel_workflow.R # replace with the path to your script
script: /esarchive/scratch/vagudets/repos/sunset/modules/test_parallel_workflow.R # replace with the path to your script
expid: a5no # replace with your EXPID
hpc_user: bsc32762 # replace with your hpc username
wallclock: 01:00 # hh:mm
......@@ -44,7 +44,7 @@ Run:
notify_failed: yes # notify me by email when a job fails
```
In order to be able to find and read the resulting recipes properly, you need to create your script following a template. Find an example of a script that works with split recipes here: [Autosubmit Snippet](https://earth.bsc.es/gitlab/es/auto-s2s/-/snippets/113)
In order to be able to find and read the resulting recipes properly, you need to create your script following a template. Find an example of a script that works with split recipes here: [Autosubmit Snippet](https://earth.bsc.es/gitlab/es/sunset/-/snippets/113)
**Step 3**: On your workstation or on nord3v2, cd to the code directory and run:
```shell
......@@ -124,11 +124,11 @@ Run:
Terminal: yes
filesystem: esarchive
output_dir: /esarchive/scratch/vagudets/auto-s2s-outputs/ # replace with the directory where you want to save the outputs
code_dir: /esarchive/scratch/vagudets/repos/auto-s2s/ # replace with the directory where your code is
code_dir: /esarchive/scratch/vagudets/repos/sunset/ # replace with the directory where your code is
autosubmit: yes
# fill only if using autosubmit
auto_conf:
script: /esarchive/scratch/vagudets/repos/auto-s2s/modules/test_parallel_workflow.R # replace with the path to your script
script: /esarchive/scratch/vagudets/repos/sunset/modules/test_parallel_workflow.R # replace with the path to your script
expid: a5no # replace with your EXPID
hpc_user: bsc32762 # replace with your hpc username
wallclock: 01:00 # hh:mm
......