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--- tools:rtools [2025/04/10 13:58]
vagudets Add information for new BSC-ES Hub modules
+++ tools:rtools [2025/06/13 12:33] (current)
vagudets [Environment Modules]
@@ Line 9: / Line 9: @@
 The Workstations, the BSC-ES Hub and the HPC machines use [[https://earth.bsc.es/wiki/doku.php?id=library:environment_modules | environment modules]], which are maintained by our IT team. Each module contains a set of software packages that can only be used if the module has been loaded in the environment.
-For example, to load CDO and R in the workstation, you should load the corresponding modules with the 'module load' command:
+For example, to load CDO and R in the hub, you should load the corresponding modules with the 'module load' command:
-    module load CDO/1.9.8-foss-2015a
+    module load CDO/2.4.4-gompi-2023b
-    module load R/4.1.2-foss-2015a-bare
+    module load R/4.4.1-gfbf-2023b
+    module load R-bundle-CRAN/2024.06-foss-2023b
 The currently maintained R module versions are:
-  * BSC-ES Hub: R/4.4.1-gfbf-2023b (+ R-bundle-CRAN/2024.06-foss-2023b for most CRAN Packages. See: [[https://earth.bsc.es/wiki/doku.php?id=computing:bsceshub || Computing - Bsceshub]])
+  * BSC-ES Hub: R/4.4.1-gfbf-2023b (+ R-bundle-CRAN/2024.06-foss-2023b for most CRAN Packages; and R-bundle-Bioconductor/3.19-foss-2023b-R-4.4.1 for Bioconductor packages. See: [[https://earth.bsc.es/wiki/doku.php?id=computing:bsceshub | Computing - Bsceshub]])
   * Nord3v2: R/4.1.2-foss-2019b (See: [[https://earth.bsc.es/wiki/doku.php?id=computing:nord3-v2|Computing - Nord3v2]])
   * CTE-AMD: R/4.1.2-foss-2019b (See: [[https://earth.bsc.es/wiki/doku.php?id=computing:amd|Computing - AMD]])
@@ Line 73: / Line 74: @@
 ====2025====
+  * R tools user meeting (Hybrid Mode, 05/06/2025){{ :tools:r_user_meeting_20250605.pdf | Slides}}
   * R tools user meeting (Hybrid Mode, 03/04/2025){{ :tools:r_user_meeting_20250403.pdf | Slides}}
   * R tools user meeting (Hybrid Mode, 06/02/2025){{ :tools:r_user_meeting_20250206.pdf | Slides}}

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