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--- tools:rtools [2024/04/22 14:48]
vagudets [Where to run R]
+++ tools:rtools [2024/05/02 14:43] (current)
vagudets [R Tips]
@@ Line 15: / Line 15: @@
 The currently maintained R module versions are:
-  * Workstations: R/4.1.2-foss-2015a-bare
+  * Workstations: R/4.1.2-foss-2015a-bare (See: [[https://earth.bsc.es/wiki/doku.php?id=computing:workstations| Computing - Workstations]])
-  * BSC-ES Hub: R/4.2.1-foss-2021b
+  * BSC-ES Hub: R/4.2.1-foss-2021b (See: [[https://earth.bsc.es/wiki/doku.php?id=computing:bsceshub|Computing - Bsceshub (Testing phase)]])
-  * Nord3v2: R/4.1.2-foss-2019b
+  * Nord3v2: R/4.1.2-foss-2019b (See: [[https://earth.bsc.es/wiki/doku.php?id=computing:nord3-v2|Computing - Nord3v2]])
-  * CTE-AMD: R/4.1.2-foss-2019b
+  * CTE-AMD: R/4.1.2-foss-2019b (See: [[https://earth.bsc.es/wiki/doku.php?id=computing:amd|Computing - AMD]])
+Check the wiki page for each machine to see if you need to follow any additional steps to be able to load the correct modules.
 ==== R packages ====
@@ Line 33: / Line 35: @@
   * To open an R session in the terminal, simply type ‘R’ after loading the R module.
   * RStudio Server is available on the Workstations and Nord3v2. See the section ‘RStudio Server’ below. RStudio Server is not yet available on the Hub, but you can use VSCode. See the ‘R tips’ section below.
-  * To use Jupyter Notebooks in the workstation, see the [[https://earth.bsc.es/wiki/doku.php?id=computing:howto:jupyter_notebooks#r_experimental | Jupyter Notebook wiki page]]
+  * To use Jupyter Notebooks in the BSC-ES Hub, see the [[https://earth.bsc.es/wiki/doku.php?id=computing:howto:jupyter_notebooks#r_experimental | Jupyter Notebook wiki page]]. For the workstations, the up-to-date R version is not working with Jupyter Notebooks.
 ===== R User Meeting =====
@@ Line 42: / Line 44: @@
 ====2024====
-  * R tools user meeting (Mix Mode, 01/02/2024){{ :tools:r_user_meeting_20240201.pdf | Slides}}
+  * R tools user meeting (Hybrid Mode, 01/02/2024){{ :tools:r_user_meeting_20240201.pdf | Slides}}
-  * R tools user meeting (Mix Mode, 04/04/2024){{ :tools:r_user_meeting_20240404.pdf | Slides}}
+  * R tools user meeting (Hybrid Mode, 04/04/2024){{ :tools:r_user_meeting_20240404.pdf | Slides}}
+  * R tools user meeting (Hybrid Mode, 02/05/2024){{ :tools:r_user_meeting_20240502.pdf | Slides}}
 ====2023====
   * R tools user meeting (Mix Mode, 14/12/2023){{ :tools:r_user_meeting_20231214.pdf | Slides}}
@@ Line 243: / Line 246: @@
-How to access, what you will find (servers, machines, partitions, modules) and how to open RStudio: check the slides and share them with your colleagues. {{ :tools:what_do_we_know_about_bsc-es_infrastructure_.pdf |slides}}
+How to access, what you will find (servers, machines, partitions, modules) and how to open RStudio: check the slides and share them with your colleagues. {{ :tools:what_do_we_know_about_bsc-es_infrastructure.pdf |slides}}
 How to access BSC Hub and run R from the terminal and using VSCode: {{ :tools:ghr_-_bschub_demo.pdf |}}

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