Commits · 0361d4024e911b28a4b0a5e180e1b4b91c299188 · Computational Earth Sciences / easybuild-easyconfigs

08 Dec, 2015 2 commits
- Merge pull request #2191 from boegel/salmon051_intel2015b_py2710 · 0361d402
  Kenneth Hoste authored Dec 08, 2015
```
{bio}[intel/2015b] Salmon 0.5.1 w/ Python 2.7.10 (REVIEW)
```
  0361d402
- Merge pull request #2061 from hpcuantwerpen/modules/numpy-scipy-scikit-umfpack · 851bcacd
  Kenneth Hoste authored Dec 08, 2015
```
Update Makefiles in SuiteSparse to make UMFPACK available in python (REVIEW)
```
  851bcacd
07 Dec, 2015 11 commits
- -openmp is required · 839044c2
  Kenneth Hoste authored Dec 07, 2015
  
  839044c2
- correctly fetch $EBROOTJELLYFISH from environment in CMakeLists.txt · 77b5bce4
  Kenneth Hoste authored Dec 07, 2015
  
  77b5bce4
- link to Jellyfish provided via EB via in CMakeLists.txt · 7e63ec44
  Kenneth Hoste authored Dec 07, 2015
  
  7e63ec44
- Merge pull request #2189 from boegel/sailfish080_intel2015b_py2710 · a51759ba
  Kenneth Hoste authored Dec 07, 2015
```
{bio}[intel/2015b] Sailfish 0.8.0 (REVIEW)
```
  a51759ba
- {bio}[intel/2015b] Salmon 0.5.1 w/ Python 2.7.10 · 615f9ec6
  Kenneth Hoste authored Dec 07, 2015
  
  615f9ec6
- Merge pull request #2190 from boegel/cufflinks221_intel2015b_py2710 · 17fb35c7
  Kenneth Hoste authored Dec 07, 2015
```
{bio}[intel/2015b] Cufflinks 2.2.1 + Eigen 3.2.7 + SAMtools 0.1.20 (REVIEW)
```
  17fb35c7
- avoid hardcoded $CMAKE_CXX_FLAGS for Sailfish · af14cda0
  Kenneth Hoste authored Dec 07, 2015
  
  af14cda0
- fix versionsuffix for Cufflinks easyconfigs + remark · ff9edddf
  Kenneth Hoste authored Dec 07, 2015
  
  ff9edddf
- add comment in patch file · c00dbdeb
  Kenneth Hoste authored Dec 07, 2015
  
  c00dbdeb
- {bio}[intel/2015b] Cufflinks 2.2.1 + Eigen 3.2.7 + SAMtools 0.1.20 · 9347a042
  Kenneth Hoste authored Dec 07, 2015
  
  9347a042
- {bio}[itnel/2015b] Sailfish 0.8.0 · 94710f35
  Kenneth Hoste authored Dec 07, 2015
  
  94710f35
04 Dec, 2015 13 commits
- Merge pull request #2187 from boegel/PPfold_fix_perms · 868525c3
  Kenneth Hoste authored Dec 04, 2015
```
fix permissions for PPfold .jar via postinstallcmds
```
  868525c3
- Merge pull request #2185 from boegel/geoip_vincent_2015a · 5d0781be
  Kenneth Hoste authored Dec 04, 2015
```
{lib,vis}[intel/2015a] GeoIP 1.3.2 + vincent 0.4.4 (REVIEW)
```
  5d0781be
- Merge pull request #2 from boegel/modules/numpy-scipy-scikit-umfpack · 1c4f908f
  sbecuwe authored Dec 04, 2015
```
tiny style fix in PCRE easyconfig
```
  1c4f908f
- Merge pull request #2184 from boegel/gsl21_intel2015b · 16ca38e9
  Kenneth Hoste authored Dec 04, 2015
```
{numlib}[intel/2015b] GSL 2.1 (REVIEW)
```
  16ca38e9
- fix permissions for PPfold .jar via postinstallcmds · ab2bc24e
  Kenneth Hoste authored Dec 04, 2015
  
  ab2bc24e
- Merge pull request #2186 from boegel/ROOT53434_intel2015b_py2710 · 42cd29c2
  Kenneth Hoste authored Dec 04, 2015
```
{data}[intel/2015b] ROOT v5.34.34 + libxml2 2.9.3 (REVIEW)
```
  42cd29c2
- tiny style fix in PCRE easyconfig · 8d6ad9d2
  Kenneth Hoste authored Dec 04, 2015
  
  8d6ad9d2
- Merge remote branch 'hpcugent/develop' into modules/numpy-scipy-scikit-umfpack · ec4ba9cc
  HPC core facility CalcUA authored Dec 04, 2015
  
  ec4ba9cc
- {data}[intel/2015b] ROOT v5.34.34 + libxml2 2.9.3 · 628db728
  Kenneth Hoste authored Dec 04, 2015
  
  628db728
- {lib,vis}[intel/2015a] GeoIP 1.3.2 + vincent 0.4.4 · cad8c63f
  Kenneth Hoste authored Dec 04, 2015
  
  cad8c63f
- {numlib}[intel/2015b] GSL 2.1 · 3d891f64
  Kenneth Hoste authored Dec 04, 2015
  
  3d891f64
- Merge pull request #2183 from boegel/PPfold · 81cc69c1
  Kenneth Hoste authored Dec 04, 2015
```
{bio}[dummy] PPfold 3.1.1 w/ Java 1.8.0_66 (REVIEW)
```
  81cc69c1
- {bio}[dummy] PPfold 3.1.1 w/ Java 1.8.0_66 · 39f2f760
  Kenneth Hoste authored Dec 04, 2015
  
  39f2f760
03 Dec, 2015 14 commits
- Merge pull request #2182 from boegel/stampy1028_intel2015b_py2710 · 56c64484
  Kenneth Hoste authored Dec 03, 2015
```
also copy 'ext', set $PATH and $PYTHONPATH correctly for Stampy
```
  56c64484
- add comment · 37b9b2cf
  Kenneth Hoste authored Dec 03, 2015
  
  37b9b2cf
- also copy 'ext', set $PATH and $PYTHONPATH correctly for Stampy · 82d527de
  Kenneth Hoste authored Dec 03, 2015
  
  82d527de
- Merge pull request #2179 from boegel/numpy1101_intel2015b_py2710 · 2a0192fd
  Kenneth Hoste authored Dec 03, 2015
```
{math}[intel/2015b] numpy 1.10.1 (REVIEW)
```
  2a0192fd
- Merge pull request #2180 from boegel/stampy1028_intel2015b_py2710 · 7295eb1e
  Kenneth Hoste authored Dec 03, 2015
```
{bio}[intel/2015b] Stampy 1.0.28 (REVIEW)
```
  7295eb1e
- remove scipy 0.16.1, tests fail on top of numpy 1.10.1 · 82369ab9
  Kenneth Hoste authored Dec 03, 2015
  
  82369ab9
- fix remark · f6db491d
  Kenneth Hoste authored Dec 03, 2015
  
  f6db491d
- fix remarks · a0149c1e
  Kenneth Hoste authored Dec 03, 2015
  
  a0149c1e
- {bio}[intel/2015b] Stampy 1.0.28 · 655362f0
  Kenneth Hoste authored Dec 03, 2015
  
  655362f0
- {math}[intel/2015b] numpy 1.10.1 + scipy 0.16.1 · 65d4734c
  Kenneth Hoste authored Dec 03, 2015
  
  65d4734c
- Merge pull request #2178 from hajgato/migrate_tweak · 43541402
  Kenneth Hoste authored Dec 03, 2015
```
{bio} [intel-2015a] MIGRATE-N 3.6.11 (REVIEW)
```
  43541402
- Merge pull request #2160 from tvandera/ga · 96864bef
  Kenneth Hoste authored Dec 03, 2015
```
{lib}[foss/2015a] GlobalArrays 5.4b (REVIEW)
```
  96864bef
- libstdc++ added · c5c5c8c2
  Balazs Hajgato authored Dec 03, 2015
  
  c5c5c8c2
- Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs into ga · 95f9bc6f
  Tom Vander Aa authored Dec 03, 2015
  
  95f9bc6f