{devel} [intel-2015b] Qt 5.5.1 (REVIEW)

{tools}[intel/2015b] HOD 3.0.3 w/ Python 2.7.10 (REVIEW)

{devel}[intel/2015b] CMake 3.4.1 (REVIEW)

{bio}[intel/2015b] Bioconductor 3.1 bundle w/ R 3.2.1 (REVIEW)

{lib}[intel/2015b] scp 0.10.2 w/ Python 2.7.10 (REVIEW)

{bio}[intel/2015b] Bowtie 2.2.6 (REVIEW)

{bio}[intel/2015b] Salmon 0.5.1 w/ Python 2.7.10 (REVIEW)

Update Makefiles in SuiteSparse to make UMFPACK available in python (REVIEW)

{bio}[intel/2015b] Sailfish 0.8.0 (REVIEW)

{bio}[intel/2015b] Cufflinks 2.2.1 + Eigen 3.2.7 + SAMtools 0.1.20 (REVIEW)

fix permissions for PPfold .jar via postinstallcmds

{lib,vis}[intel/2015a] GeoIP 1.3.2 + vincent 0.4.4 (REVIEW)

tiny style fix in PCRE easyconfig

{numlib}[intel/2015b] GSL 2.1 (REVIEW)

{data}[intel/2015b] ROOT v5.34.34 + libxml2 2.9.3 (REVIEW)

{bio}[dummy] PPfold 3.1.1 w/ Java 1.8.0_66 (REVIEW)

also copy 'ext', set $PATH and $PYTHONPATH correctly for Stampy