Commits · 246df81e183e3d960fda2d3ce74482f6ccac8880 · Computational Earth Sciences / easybuild-easyconfigs

30 Nov, 2016 4 commits
- Merge pull request #3873 from boegel/develop · 246df81e
  Kenneth Hoste authored Nov 30, 2016
```
sync with master after EasyBuild v3.0.1 release
```
  246df81e
- bump version (again) to 3.1.0.dev0 · db1ece49
  Kenneth Hoste authored Nov 30, 2016
  
  db1ece49
- Merge pull request #3870 from hpcugent/eb301 · a0d238e9
  Kenneth Hoste authored Nov 30, 2016
```
release EasyBuild v3.0.1
```
  easybuild-easyconfigs-v3.0.1
  
  a0d238e9
- Merge pull request #3865 from boegel/eb301 · 927bb73f
  Kenneth Hoste authored Nov 30, 2016
```
release EasyBuild v3.0.1
```
  927bb73f
29 Nov, 2016 9 commits
- Merge pull request #3627 from pescobar/20160927164406_new_pr_BayPass21 · 5b5533a2
  Kenneth Hoste authored Nov 29, 2016
```
{bio}[goolf/1.7.20] BayPass v2.1
```
  5b5533a2
- Merge pull request #3866 from boegel/20161129134443_new_pr_ccache333 · 6638d43d
  Kenneth Hoste authored Nov 29, 2016
```
{tools}[dummy/] ccache v3.3.3
```
  6638d43d
- adding easyconfigs: ccache-3.3.3.eb · 8a026295
  Kenneth Hoste authored Nov 29, 2016
  
  8a026295
- bump version to v3.0.1 · 36cf0538
  Kenneth Hoste authored Nov 29, 2016
  
  36cf0538
- include #3826, update counts · 0e0ea6d4
  Kenneth Hoste authored Nov 29, 2016
  
  0e0ea6d4
- include #3858 in release notes for EasyBuild v3.0.1 · f33aaa62
  Kenneth Hoste authored Nov 29, 2016
  
  f33aaa62
- fix release notes for eb301 · 7c361db3
  Miguel Dias Costa authored Nov 29, 2016
  
  7c361db3
- prepare release notes for eb301 · 1042d30a
  Miguel Dias Costa authored Nov 29, 2016
  
  1042d30a
- Merge pull request #3858 from tjslauson/dadi-1.7.0-run-tests · dc82934f
  Kenneth Hoste authored Nov 29, 2016
```
Run dadi 1.7.0 test suite as a sanity_check_command
```
  dc82934f
28 Nov, 2016 3 commits
- Rewrite sanity_check_commands to specify a string and use a glob · acc09558
  Tim Slauson authored Nov 28, 2016
  
  acc09558
- Merge pull request #3863 from boegel/20161128134404_new_pr_BBMap3662 · 2ed975f1
  Kenneth Hoste authored Nov 28, 2016
```
{bio}[intel/2016b] BBMap v36.62
```
  2ed975f1
- adding easyconfigs: BBMap-36.62-intel-2016b-Java-1.8.0_112.eb · 9581b13a
  Kenneth Hoste authored Nov 28, 2016
  
  9581b13a
26 Nov, 2016 11 commits
- Merge pull request #3827 from pescobar/20161118125900_new_pr_Cookiecutter140 · 1b8bb97b
  Kenneth Hoste authored Nov 26, 2016
```
{bio}[goolf/1.7.20] Cookiecutter v1.4.0
```
  1b8bb97b
- change order or dependencies · 0d4aecf0
  Pablo Escobar Lopez authored Nov 26, 2016
  
  0d4aecf0
- Merge pull request #3834 from verdurin/20161120215337_new_pr_ea-utils27a4809 · e4004a21
  Kenneth Hoste authored Nov 26, 2016
```
{bio}[foss/2016b] ea-utils v27a4809
```
  e4004a21
- Merge pull request #3861 from boegel/20161126171915_new_pr_BLAST2226 · 568fd7fc
  Kenneth Hoste authored Nov 26, 2016
```
fix download URL in BLAST 2.2.26 easyconfig
```
  568fd7fc
- adding easyconfigs: BLAST-2.2.26-Linux_x86_64.eb · 43484a6c
  Kenneth Hoste authored Nov 26, 2016
  
  43484a6c
- Merge pull request #3823 from boegel/20161117163342_new_pr_IPython510 · 6c79abba
  Kenneth Hoste authored Nov 26, 2016
```
add widgetsnbextension extension to IPython 5.1.0 easyconfig, fix modulename for Jinja2 and Pygments
```
  6c79abba
- Merge pull request #3860 from verdurin/20161126130119_new_pr_findhap4 · 2c1b66bb
  Kenneth Hoste authored Nov 26, 2016
```
{bio}[dummy/dummy] findhap v4
```
  2c1b66bb
- Add example input files to sanity_check · dda37b55
  Adam Huffman authored Nov 26, 2016
  
  dda37b55
- adding easyconfigs: findhap-4.eb · b9ed8786
  Adam Huffman authored Nov 26, 2016
  
  b9ed8786
- Merge pull request #3846 from verdurin/20161121121051_new_pr_Cufflinks221 · 2d8207b7
  Kenneth Hoste authored Nov 26, 2016
```
{bio}[foss/2016b] Cufflinks v2.2.1, Boost v1.61.0, SAMtools v0.1.19
```
  2d8207b7
- Update Boost-1.61.0-foss-2016b-Python-2.7.12.eb · 47dab1f4
  Adam Huffman authored Nov 26, 2016
```
Fix hard coded source file version
```
  47dab1f4
25 Nov, 2016 2 commits
- Merge pull request #3859 from boegel/20161124143331_new_pr_PhyloBayes-MPI20161021 · 9fa19713
  Kenneth Hoste authored Nov 25, 2016
```
{bio}[intel/2016b] PhyloBayes-MPI v20161021
```
  9fa19713
- Remove unwanted build artefacts and outdated comment re upstream Cufflinks/Boost bug · 30cc8f30
  Adam Huffman authored Nov 25, 2016
  
  30cc8f30
24 Nov, 2016 11 commits
- adding easyconfigs: PhyloBayes-MPI-20161021-intel-2016b.eb · 7340994d
  Kenneth Hoste authored Nov 24, 2016
  
  7340994d
- Merge pull request #3814 from akesandgren/20161116202500_new_pr_iomkl201701 · ce587165
  Kenneth Hoste authored Nov 24, 2016
```
{toolchain}[dummy/dummy] iomkl v2017.01, iompi v2017.01
```
  ce587165
- Merge pull request #3856 from boegel/20161123164123_new_pr_LoFreq212 · a51ec554
  Kenneth Hoste authored Nov 24, 2016
```
{bio}[intel/2016b] LoFreq v2.1.2
```
  a51ec554
- Fix missing " " · 53e75ffe
  Ake Sandgren authored Nov 24, 2016
  
  53e75ffe
- Remove redundant depenedncies. · 8a33a0b8
  Ake Sandgren authored Nov 24, 2016
  
  8a33a0b8
- Merge pull request #3855 from boegel/20161123161443_new_pr_SAMtools131 · a4a2c7ad
  Kenneth Hoste authored Nov 24, 2016
```
{bio}[intel/2016b] SAMtools v1.3.1, HTSlib v1.3.2
```
  a4a2c7ad
- Merge pull request #3857 from wpoely86/ete · 40e41710
  Kenneth Hoste authored Nov 24, 2016
```
{vis} [intel/2016b] ETE/3.0.0b36 (READY)
```
  40e41710
- Add HPL easyconfig as test case for the new iomkl/2017.01 toolchain. · 11f7e67c
  Ake Sandgren authored Nov 24, 2016
  
  11f7e67c
- Use the correct version for imkl/iompi toolchains and dependencies. · 3cb74625
  Ake Sandgren authored Nov 24, 2016
  
  3cb74625
- Merge branch 'develop' into 20161116202500_new_pr_iomkl201701 · 222c9314
  Ake Sandgren authored Nov 24, 2016
  
  222c9314
- Drop unused patch block and re-enable enable-mpi-thread-multiple. · e8278b20
  Ake Sandgren authored Nov 24, 2016
```
The patches aren't needed any longer.
Re-enable enable-mpi-thread-multiple, it was a site local change that
shouldn't have been there in the first place.
```
  e8278b20