Commits · 401c65c8a5e5ce1eba934b6f3a4f22bb6f6c49e9 · Computational Earth Sciences / easybuild-easyconfigs

13 Dec, 2016 3 commits
- update to 2.3.0 + foss2016a · 401c65c8
  Bob Dröge authored Dec 13, 2016
  
  401c65c8
- Merge pull request #3926 from verdurin/20161208234304_new_pr_RSeQC264 · 3979590c
  Kenneth Hoste authored Dec 13, 2016
```
{bio}[foss/2016b] RSeQC v2.6.4
```
  3979590c
- Remove unnecessary numpy and Pysam · ac2168d5
  Adam Huffman authored Dec 13, 2016
  
  ac2168d5
12 Dec, 2016 3 commits
- Merge pull request #3871 from hpcuantwerpen/modules/Mono · 6695aecc
  Kenneth Hoste authored Dec 12, 2016
```
{lang}[dummy,intel/2016b] Mono 4.6.2.7 (REVIEW)
```
  6695aecc
- Merge pull request #3897 from boegel/20161206114144_new_pr_PyNAST122 · d8a04e0f
  Kenneth Hoste authored Dec 12, 2016
```
{bio}[intel/2016b] PyNAST v1.2.2, PyCogent v1.9
```
  d8a04e0f
- Merge pull request #3 from boegel/modules/Mono · 89daf3a9
  Franky Backeljauw authored Dec 12, 2016
```
use available Mono easyblock, add build deps in Mono easyconfigs
```
  89daf3a9
11 Dec, 2016 1 commit
- Remove unnecessary numpy, use variables better and update Pysam dep · 7e31e62a
  Adam Huffman authored Dec 11, 2016
  
  7e31e62a
10 Dec, 2016 3 commits
- Merge pull request #3927 from verdurin/20161210150109_new_pr_SWIG3010 · 76ea5847
  Kenneth Hoste authored Dec 10, 2016
```
{devel}[foss/2016b] SWIG v3.0.10
```
  76ea5847
- adding easyconfigs: SWIG-3.0.10-foss-2016b-Python-2.7.12.eb · 80c17131
  Adam Huffman authored Dec 10, 2016
  
  80c17131
- Add missing deps · 0f273d60
  Adam Huffman authored Dec 10, 2016
  
  0f273d60
09 Dec, 2016 8 commits
- Merge pull request #3749 from akesandgren/Allinea-6.1.1-using-new-allinea-easyblock · 2cc6a5a1
  Kenneth Hoste authored Dec 09, 2016
```
Add a new Allinea easyconfig for the latest 6.1.1 version.
```
  2cc6a5a1
- Fix typo, missing "/" · cad16c8f
  Ake Sandgren authored Dec 09, 2016
  
  cad16c8f
- use available Mono easyblock, add build deps in Mono easyconfigs · 7aa7c372
  Kenneth Hoste authored Dec 09, 2016
  
  7aa7c372
- Don't use import in easyconfig files, change older Allinea .eb files too. · 0bf71e2a
  Ake Sandgren authored Dec 09, 2016
  
  0bf71e2a
- Don't use import in easyconfig files · 96222037
  Ake Sandgren authored Dec 09, 2016
  
  96222037
- Make version string match name of easyconfig file. · e3a74ecd
  Ake Sandgren authored Dec 09, 2016
```
Simplify sources definition.
```
  e3a74ecd
- Merge pull request #3896 from boegel/20161206114028_new_pr_UCLUST1222q · 08a0362d
  Kenneth Hoste authored Dec 09, 2016
```
{base,bio}[dummy/dummy] UCLUST v1.2.22q, USEARCH v5.2.236-6.1.544
```
  08a0362d
- adding easyconfigs: RSeQC-2.6.4-foss-2016b-Python-2.7.12-R-3.3.1.eb · 83b557f4
  Adam Huffman authored Dec 09, 2016
  
  83b557f4
08 Dec, 2016 18 commits
- Merge pull request #3921 from boegel/numpy_scipy_zipped · 54dadcdf
  Kenneth Hoste authored Dec 08, 2016
```
install numpy/scipy as .egg to ensure shadowing of numpy/scipy in parent Python installation
```
  54dadcdf
- install numpy/scipy as .egg to ensure shadowing of numpy/scipy in parent Python installation · 11e61f2f
  Kenneth Hoste authored Dec 08, 2016
  
  11e61f2f
- Merge pull request #3917 from boegel/20161208151112_new_pr_travis184 · 3f1ecdd9
  Kenneth Hoste authored Dec 08, 2016
```
{lang,tools}[dummy/,dummy/dummy] travis v1.8.4, Ruby v2.3.3
```
  3f1ecdd9
- adding easyconfigs: travis-1.8.4-Ruby-2.3.3.eb, Ruby-2.3.3.eb · 5f113b8f
  Kenneth Hoste authored Dec 08, 2016
  
  5f113b8f
- Merge pull request #3805 from jhein32/vtune-2017-update1 · aca6362f
  Kenneth Hoste authored Dec 08, 2016
```
version push for 2017 update 1
```
  aca6362f
- Merge pull request #3914 from verdurin/20161208121235_new_pr_zsh52 · 16c1a8b4
  Kenneth Hoste authored Dec 08, 2016
```
{tools}[foss/2016b] zsh v5.2
```
  16c1a8b4
- Merge pull request #3913 from jhein32/cmake_371_gcc_core · d8d670bf
  Kenneth Hoste authored Dec 08, 2016
```
Fileset for recent CMake versions in GCCcore compilers
```
  d8d670bf
- adding easyconfigs: zsh-5.2-foss-2016b.eb · 5098a192
  Adam Huffman authored Dec 08, 2016
  
  5098a192
- Fileset for recent CMake versions in GCCcore compilers · b8d23bb1
  Joachim Hein authored Dec 08, 2016
```
CMake in the GCCcore will support all foss, intel and pomkl toolchains
using that GCCcore.
```
  b8d23bb1
- Merge pull request #3905 from boegel/20161207143136_new_pr_numpy192 · 69fedf64
  Kenneth Hoste authored Dec 08, 2016
```
{lib}[intel/2016b] numpy 1.9.2, scipy 0.16.0 w/ Python 2.7.12
```
  69fedf64
- Merge pull request #3900 from jhein32/hdf5-1.10.0-patch1 · f662ee12
  Kenneth Hoste authored Dec 08, 2016
```
Hdf5 1.8.18 and 1.10.0-patch1
```
  f662ee12
- remove --ignore-installed install option, already done in PythonPackage... · 00cf07ab
  Kenneth Hoste authored Dec 08, 2016
```
remove --ignore-installed install option, already done in PythonPackage easyblock with https://github.com/hpcugent/easybuild-easyblocks/pull/1066
```
  00cf07ab
- Merge pull request #3906 from verdurin/20161207144045_new_pr_Subread150p1 · a230c2d0
  Kenneth Hoste authored Dec 08, 2016
```
{bio}[foss/2016b] Subread v1.5.0-p1
```
  a230c2d0
- Merge pull request #3908 from verdurin/20161207144158_new_pr_PLINK107 · b4ddb38f
  Kenneth Hoste authored Dec 08, 2016
```
{bio}[foss/2016b] PLINK v1.07
```
  b4ddb38f
- Merge pull request #3910 from rug-cit-ris/psmc_065_foss_2016a · 472872dd
  Kenneth Hoste authored Dec 08, 2016
```
{bio}[foss/2016a] psmc 0.6.5
```
  472872dd
- Merge pull request #3903 from hajgato/RASPA2 · a5019edd
  Kenneth Hoste authored Dec 08, 2016
```
{phys}[intel/2016b] RASPA2 2.0.3 w/Python-2.7.12 (REVIEW)
```
  a5019edd
- Change for https URL in pkg-config eb-files · 57a5004d
  Joachim Hein authored Dec 08, 2016
  
  57a5004d
- sanity_check_paths removed egg directory from path · 6125a767
  Balazs Hajgato authored Dec 08, 2016
  
  6125a767
07 Dec, 2016 4 commits
- Merge pull request #3895 from boegel/moar_style_fixes · 10fa9c89
  Kenneth Hoste authored Dec 07, 2016
```
trivial style fixes (t-v) + replace tabs w/ spaces
```
  10fa9c89
- avoid that pip uninstalls numpy/scipy in 'parent' Python installation, add clarifying comments · c4e8db16
  Kenneth Hoste authored Dec 07, 2016
  
  c4e8db16
- remove empty line · ed49ba79
  Bob Dröge authored Dec 07, 2016
  
  ed49ba79
- Removed an obsolete line · d085efbf
  Bob Dröge authored Dec 07, 2016
  
  d085efbf