Same as foss 2016a except that OpenMPI is replaced by MVAPICH2.

Delete deprecated Cray toolchains and easyconfig files (for stable cray support)

{bio}[foss/2015b] NextClip (REVIEW)

add easyconfigs for ATSAS

{bio}[dummy] ATSAS-2.7.1-1

new CrayGNU files for 2015.06-XC 

new CrayGNU files for 2015.11-XC

{bio}[foss-2015b] PLINK 1.07

{bio}[foss-2015b] GROMACS 5.1.2

removed PrgEnv version, craype and fftw from the new Cray* XC toolchain (REVIEW)

{bio}[foss-2015b] Bowtie2 2.2.7

sync with develop & resolve conflicts

fix FFTW lib/include path in configopts for GROMACS w/ CrayGNU

fix FFTW lib/include path in configopts for GROMACS w/ CrayGNU

1) Added comment and author.
2) Strip superfluous `-w` from perl shebang line.  - the scripts already use the `use warnings;` pragma.

{tools}[dummy/dummy] MLC v3.0

add metagenomeSeq in Bioconductor bundle

{vis} [goolf-1.4.10] ImageMagick-6.9.3-2 (REVIEW)