Commits · 42b700b5c1f404196aab8dc21c1f1159caad949e · Computational Earth Sciences / easybuild-easyconfigs

25 Feb, 2016 12 commits
- add easyconfig nco-0.0.2-intel-2016a-Python-2.7.11.eb · 42b700b5
  Kenneth Hoste authored Feb 25, 2016
  
  42b700b5
- Merge pull request #2569 from verdurin/cutadapt-1.9.1 · 0432f22b
  Kenneth Hoste authored Feb 25, 2016
```
Update cutadapt to 1.9.1 for foss-2015b
```
  0432f22b
- Use SHLIB_EXT for Python shared objects · 6d8707cc
  Adam Huffman authored Feb 25, 2016
  
  6d8707cc
- Merge pull request #2573 from hajgato/xorg-macros2016a · 1097eb5c
  Kenneth Hoste authored Feb 25, 2016
  
  1097eb5c
- {devel}[intel-2016b] xorg-mactos 1.19.0 (REVIEW) · 03e33466
  Balazs Hajgato authored Feb 25, 2016
  
  03e33466
- Merge pull request #2571 from verdurin/star-2.5.1-foss-2015b · a13df4d9
  Kenneth Hoste authored Feb 25, 2016
  
  a13df4d9
- Merge pull request #2572 from verdurin/picard-2.1.0 · 67619a69
  Kenneth Hoste authored Feb 25, 2016
  
  67619a69
- Merge pull request #2568 from verdurin/fastqc-dummy-0.11.4 · b784d2a2
  Kenneth Hoste authored Feb 25, 2016
```
Update fastqc dummy to 0.11.4
```
  b784d2a2
- Update picard to 2.1.0 including move to GitHub · 46da2c8b
  Adam Huffman authored Feb 25, 2016
  
  46da2c8b
- Port STAR 2.5.1b to foss-2015b · ea900fa9
  Adam Huffman authored Feb 25, 2016
  
  ea900fa9
- Update cutadapt to 1.9.1 for foss-2015b, update homepage/description and authors · 6666182f
  Adam Huffman authored Feb 25, 2016
  
  6666182f
- Update fastqc dummy to 0.11.4 · 34f5c330
  Adam Huffman authored Feb 25, 2016
  
  34f5c330
24 Feb, 2016 11 commits
- Merge pull request #2561 from pescobar/pcre-configure-fix · 5a3a010a
  Kenneth Hoste authored Feb 24, 2016
```
fix pcre config options. Required for future R lang releases
```
  5a3a010a
- fix pcre config options. Required for future R lang releases · 986ed755
  Pablo Escobar authored Feb 24, 2016
  
  986ed755
- Merge pull request #2560 from hajgato/eudev315i2016a · d83f6ee0
  Kenneth Hoste authored Feb 24, 2016
```
{system}[intel-2016b] eudev 3.1.5 (REVIEW)
```
  d83f6ee0
- Merge pull request #2557 from pescobar/ctffind · a564da17
  Kenneth Hoste authored Feb 24, 2016
```
{bio} [intel/2015a] ctffind-4.0.17  (Review) 
```
  a564da17
- Merge pull request #2559 from hajgato/llvm371intel · d19b2e00
  Kenneth Hoste authored Feb 24, 2016
```
{compiler}[intel-2016b] LLVM 3.7.1 (REVIEW)
```
  d19b2e00
- {system}[intel-2016b] eudev 3.1.5 (REVIEW) · 1c022d28
  Balazs Hajgato authored Feb 24, 2016
  
  1c022d28
- {compiler}[intel-2016b] LLVM 3.7.1 (REVIEW) · 2a35ad17
  Balazs Hajgato authored Feb 24, 2016
  
  2a35ad17
- switch toolchain from intel-2015a to intel-2015b · 2d163f93
  Pablo Escobar authored Feb 24, 2016
  
  2d163f93
- Merge pull request #2508 from verdurin/R-synchronicity · 977d9029
  Kenneth Hoste authored Feb 24, 2016
```
{lang} [foss-2015b] R-synchronicity-1.1.9.1-R-3.2.3
```
  977d9029
- Merge pull request #1056 from boegel/ocaml_pplacer · 9d56e583
  Kenneth Hoste authored Feb 24, 2016
```
add easyconfigs for pplacer and OCaml deps (REVIEW)
```
  9d56e583
- Use Boost 1.60.0 without Python extra ver for BH · 5b24009a
  Adam Huffman authored Feb 24, 2016
  
  5b24009a
23 Feb, 2016 17 commits
- Merge pull request #2553 from boegel/moar_bioc · 6490605f
  Kenneth Hoste authored Feb 23, 2016
```
add HCsnip to Bioconductor bundles
```
  6490605f
- ctffind-4.0.17-intel-2015a.eb · 3f5d02ad
  Pablo Escobar authored Feb 23, 2016
  
  3f5d02ad
- Merge pull request #2556 from boegel/r320_bioc_deps · 41e3f8f7
  Kenneth Hoste authored Feb 23, 2016
```
add additional deps required for Bioconductor extensions
```
  41e3f8f7
- add additional deps required for Bioconductor extensions · 2c337996
  Kenneth Hoste authored Feb 23, 2016
  
  2c337996
- Merge pull request #2547 from boegel/R321_exts_update · c35a26a0
  Kenneth Hoste authored Feb 23, 2016
```
extend list of extensions for R 3.2.1
```
  c35a26a0
- Merge pull request #2552 from boegel/20160223170537_new_pr_ANSYS_CFD170 · e8fd0220
  Kenneth Hoste authored Feb 23, 2016
```
{cae}[dummy/dummy] ANSYS_CFD v17.0
```
  e8fd0220
- Merge pull request #2555 from boegel/libxml2_with_zlib · c66c6035
  Kenneth Hoste authored Feb 23, 2016
```
add --with-zlib configure argument in libxml easyconfigs
```
  c66c6035
- Merge pull request #2546 from hajgato/python351bis · b1513131
  Kenneth Hoste authored Feb 23, 2016
```
Remove hard-coded -xSSE4.2 for numpy/scipy with intel compiler
```
  b1513131
- Merge pull request #2551 from pescobar/libxml2-with-proper-zlib-config · b7c63f6a
  Kenneth Hoste authored Feb 23, 2016
```
{lib} [goolf-1.7.20]  libxml2-2.9.3 (REVIEW)
```
  b7c63f6a
- add --with-zlib configure argument in libxml easyconfigs · 7ff6b215
  Kenneth Hoste authored Feb 23, 2016
  
  7ff6b215
- add more extensions, use patch file when building multicool with intel toolchain · 009ca851
  Kenneth Hoste authored Feb 23, 2016
  
  009ca851
- Merge pull request #2550 from boegel/FWO · f8c730c1
  Kenneth Hoste authored Feb 23, 2016
```
Hercules foundation is now FWO
```
  f8c730c1
- fix order · 97c56f72
  Kenneth Hoste authored Feb 23, 2016
  
  97c56f72
- add HCsnip to Bioconductor bundles · 1334f50e
  Kenneth Hoste authored Feb 23, 2016
  
  1334f50e
- add easyconfig ANSYS_CFD-17.0.eb · 007e9727
  Kenneth Hoste authored Feb 23, 2016
  
  007e9727
- added new libxml2 with proper configure options to use zlib provided by · 9dfe8a7f
  Pablo Escobar authored Feb 23, 2016
```
easybuild
```
  9dfe8a7f
- fix remarks · ed3d5eed
  Kenneth Hoste authored Feb 23, 2016
  
  ed3d5eed