Commits · 4c03927811a12a479657fa635fd2a0c5808ddabd · Computational Earth Sciences / easybuild-easyconfigs

29 Aug, 2013 40 commits
- Merge pull request #402 from fgeorgatos/HPCBIOS_standards_init · 4c039278
  Kenneth Hoste authored Aug 29, 2013
```
HPCBIOS standards init()
```
  4c039278
- Merge pull request #407 from fgeorgatos/HPCBIOS_Bioinfo · d8620e65
  Kenneth Hoste authored Aug 29, 2013
```
HPCBIOS Bioinfo
```
  d8620e65
- fix last remark on TV · 4c45d4b6
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  4c45d4b6
- Merge pull request #336 from boegel/Rosetta · e39f74c0
  Kenneth Hoste authored Aug 29, 2013
```
add ictce easyconfigs for Rosetta and SCons
```
  e39f74c0
- use SCons using Python 2.7.3 as build dep for Rosetta, add ictce/5.3.0 versions · 71ec90ca
  Kenneth Hoste authored Aug 29, 2013
  
  71ec90ca
- one grand commit to fix them all · 0756f62a
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  0756f62a
- Merge pull request #23 from boegel/HPCBIOS_Bioinfo · 3fe9c6cb
  Fotis Georgatos authored Aug 29, 2013
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fix filename issues + sync with develop
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  3fe9c6cb
- correct filename for CD-HIT · 2537d51d
  Kenneth Hoste authored Aug 29, 2013
  
  2537d51d
- fix Biopython filenames · c7526ae1
  Kenneth Hoste authored Aug 29, 2013
  
  c7526ae1
- Merge branch 'develop' into HPCBIOS_Bioinfo · f14e373b
  Kenneth Hoste authored Aug 29, 2013
  
  f14e373b
- Merge branch 'HPCBIOS_Bioinfo' of github.com:fgeorgatos/easybuild-easyconfigs into HPCBIOS_Bioinfo · 8914770f
  Kenneth Hoste authored Aug 29, 2013
  
  8914770f
- Merge pull request #412 from boegel/pr400 · 63b608ee
  Kenneth Hoste authored Aug 29, 2013
```
add ictce/5.2.0 easyconfigs
```
  63b608ee
- Merge branch 'develop' into pr400 · 0421f0e7
  Kenneth Hoste authored Aug 29, 2013
```
Conflicts:
	easybuild/easyconfigs/h/HDF5/HDF5-1.8.10-ictce-4.1.13-gpfs.eb
	easybuild/easyconfigs/h/HDF5/HDF5-1.8.10-ictce-4.1.13.eb
	easybuild/easyconfigs/h/HDF5/HDF5-1.8.10-ictce-5.3.0-gpfs.eb
	easybuild/easyconfigs/h/HDF5/HDF5-1.8.10-ictce-5.3.0.eb
	easybuild/easyconfigs/h/HDF5/HDF5-1.8.7-goolf-1.4.10.eb
	easybuild/easyconfigs/h/HDF5/HDF5-1.8.9-goolf-1.4.10.eb
	easybuild/easyconfigs/h/HDF5/HDF5-1.8.9-ictce-4.1.13.eb
	easybuild/easyconfigs/h/HDF5/HDF5-1.8.9-ictce-5.3.0.eb
```
  0421f0e7
- Merge pull request #413 from boegel/cmmsoftware · 0f2156cf
  Kenneth Hoste authored Aug 29, 2013
```
add easyconfigs for Horton and YAFF, and dependencies
```
  0f2156cf
- specify matplotlibrc location via $MATPLOTLIBRC · b5ab1f65
  Kenneth Hoste authored Aug 29, 2013
  
  b5ab1f65
- fix typos, add comments · 16d1a34e
  Kenneth Hoste authored Aug 29, 2013
  
  16d1a34e
- use non-X11 backend for yaff tests as well, add comment · d6f7e33a
  Kenneth Hoste authored Aug 29, 2013
  
  d6f7e33a
- fix Oases easyconfigs · 361da4f2
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  361da4f2
- fix NEURON easyconfigs · b1a41b06
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  b1a41b06
- add & fix BioPerl-1.6.1-ictce-5.3.0-Perl-5.16.3.eb · a39a9ed4
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  a39a9ed4
- add & fix BamTools-2.2.3-ictce-5.3.0.eb · 281ea0bd
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  281ea0bd
- 1st round of HPCBIOS_Bioinfo fixes · 1d376630
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  1d376630
- indent properly BLAST-2.2.28-goolf-1.4.10-Python-2.7.3.eb · 1080db05
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  1080db05
- bugfix %(version)s · 43ce88f0
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  43ce88f0
- tune RAxML sources to %(version) style · 0528d21a
  Fotis Georgatos authored Aug 29, 2013
```
Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
```
  0528d21a
- Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs into HPCBIOS_Bioinfo · f9ab0f1a
  Fotis Georgatos authored Aug 29, 2013
  
  f9ab0f1a
- add comment in METIS patch file · f12c20b3
  Kenneth Hoste authored Aug 29, 2013
  
  f12c20b3
- Merge branch 'cmmsoftware' of github.com:tovrstra/easybuild-easyconfigs into cmmsoftware · b298f46d
  Kenneth Hoste authored Aug 29, 2013
  
  b298f46d
- Make molmod and horton tests run on a headless machine · 1e1073d0
  Toon Verstraelen authored Aug 29, 2013
  
  1e1073d0
- Merge pull request #411 from fgeorgatos/410_fix_R_moduleclass · 2dfeeda1
  Kenneth Hoste authored Aug 29, 2013
```
410 fix R moduleclass
```
  2dfeeda1
- don't pick up in easyconfig, this is handled by easyblock (cfr.... · a2febd90
  Kenneth Hoste authored Aug 29, 2013
```
don't pick up  in easyconfig, this is handled by easyblock (cfr. https://github.com/hpcugent/easybuild-easyblocks/pull/243)
```
  a2febd90
- correct FIAT source URLs · 97d23eae
  Kenneth Hoste authored Aug 29, 2013
  
  97d23eae
- Merge branch 'develop' into cmmsoftware · 69ee4acc
  Kenneth Hoste authored Aug 29, 2013
  
  69ee4acc
- fix configopts for ictce 5.2.0 Boost easyconfigs w/o Python, add gettext dep for git · 7e4be42d
  Kenneth Hoste authored Aug 29, 2013
  
  7e4be42d
- fix source spec for GMP 5.1.1 ictce-5.2.0 · 6fa0540b
  Kenneth Hoste authored Aug 29, 2013
  
  6fa0540b
- fix libffi patch, add CMake build dep for METIS 5.1.0 · e161814c
  Kenneth Hoste authored Aug 29, 2013
  
  e161814c
- consistent style fixes in Python/ScientificPython/Szip/zlib easyconfigs · 035610de
  Kenneth Hoste authored Aug 29, 2013
  
  035610de
- consistent style fixes in ncurses easyconfigs · f0d9ae27
  Kenneth Hoste authored Aug 29, 2013
  
  f0d9ae27
- consistent style fixes in METIS easyconfigs · 14eaae8b
  Kenneth Hoste authored Aug 29, 2013
  
  14eaae8b
- consistent style fixes in HDF5 easyconfigs · 4cc97e45
  Kenneth Hoste authored Aug 29, 2013
  
  4cc97e45