{vis}[goolf-1.4.10-Python-2.7.5] Pmw 1.3.3 (REVIEW)

Consistently use CLooG 0.18.0 for GCC 4.8 series

{toolchain} [iomkl/2015.02] (REVIEW)

{system} [dummy] rCUDA 4.0.1 & 5.0 (REVIEW)

Signed-off-by: Fotis Georgatos <fotis@cern.ch>

{toolchain} [intel/2015.02] (REVIEW)

rename GenomeAnalysisTk easyconfigs to GATK

[goolf/1.4.10, ictce/5.3.0] FSA, PRANK, SMALT, Infernal and deps (WIP)

{bio} [foos/2014b] cutadapt (REVIEW)  

{bio}[dummy] Coot 0.8.1 (Review)

added Java dependencies to EMBOSS easyconfigs

Signed-off-by: Fotis Georgatos <fotis@cern.ch>

Signed-off-by: Fotis Georgatos <fotis@cern.ch>

revert back to v1.7.0_10 for compatibility with HPCBIOS easyconfigs

GATK-3.3-0 with message on load (modloadmsg) for convenience

Conflicts:
	easybuild/easyconfigs/e/EMBOSS/EMBOSS-6.5.7-goolf-1.4.10.eb
	easybuild/easyconfigs/e/EMBOSS/EMBOSS-6.5.7-ictce-4.1.13.eb
	easybuild/easyconfigs/e/EMBOSS/EMBOSS-6.5.7-ictce-5.3.0.eb

{bio}[dummy] Picard 1.119 (REVIEW)

[lang]{dummy} Java 1.7.0_75 (REVIEW)

 {toolchains} [gmvapich2, gmvolf]