{cae}[intel/2016b] MATSim 0.8.1 w/Java-1.8.0_112 (REVIEW)

libharu 2.3.0 with foss2016a

fix test that verifies dumped easyconfig, take into account that dumped dependencies may include hardcoded dependency

h5py for Python 3.5 in foss 2016b and h5py for intel 2016b

fix test that verifies dumped easyconfig, take into account that dumped dependencies may include hardcoded dependency

This is a follow up to an earlier PR providing the latest HDF5 versions
1.8.18 and 1.10.0-patch1.  This PR contains python bindings for Python
3.5 in foss 2016b and hdf5 in Intel 2016b

Pyzmq 16.0.2

Added the easyconfig files for pyzmq in foss/2016b and intel/2016b

Also fix to checksum in zeromq for intel 2016b

{bio}[foss/2016b] RSeQC v2.6.4

{lang}[dummy,intel/2016b] Mono 4.6.2.7 (REVIEW)

{bio}[intel/2016b] PyNAST v1.2.2, PyCogent v1.9

use available Mono easyblock, add build deps in Mono easyconfigs

{devel}[foss/2016b] SWIG v3.0.10

Add a new Allinea easyconfig for the latest 6.1.1 version.

Simplify sources definition.

{base,bio}[dummy/dummy] UCLUST v1.2.22q, USEARCH v5.2.236-6.1.544

install numpy/scipy as .egg to ensure shadowing of numpy/scipy in parent Python installation

{lang,tools}[dummy/,dummy/dummy] travis v1.8.4, Ruby v2.3.3

version push for 2017 update 1

{tools}[foss/2016b] zsh v5.2

Fileset for recent CMake versions in GCCcore compilers