Commits · acc095582e575f45930d00f3cba7965f2861e6e4 · Computational Earth Sciences / easybuild-easyconfigs · GitLab

28 Nov, 2016 - 1 commit
- Rewrite sanity_check_commands to specify a string and use a glob · acc09558
  Tim Slauson authored Nov 28, 2016
  
  acc09558
23 Nov, 2016 - 4 commits
- Run dadi 1.7.0 test suite as a sanity_check_command · eef67602
  Tim Slauson authored Nov 23, 2016
  
  eef67602
- Merge pull request #3839 from verdurin/20161120232013_new_pr_MAFFT7305 · edb9acec
  Kenneth Hoste authored Nov 23, 2016
```
{bio}[foss/2016b] MAFFT v7.305
```
  edb9acec
- Merge pull request #3837 from verdurin/20161120221912_new_pr_GMAP-GSNAP20161107 · 509b30ae
  Kenneth Hoste authored Nov 23, 2016
```
{bio}[foss/2016b] GMAP-GSNAP v2016-11-07
```
  509b30ae
- Merge pull request #3843 from verdurin/20161121080220_new_pr_Oases0208 · 8c33dab9
  Kenneth Hoste authored Nov 23, 2016
```
{bio}[foss/2016b] Oases v0.2.08
```
  8c33dab9
22 Nov, 2016 - 13 commits
- Merge pull request #3852 from boegel/20161122135900_new_pr_OpenCV310 · 2d077f9f
  Kenneth Hoste authored Nov 22, 2016
```
{vis}[intel/2016b] OpenCV v3.1.0
```
  2d077f9f
- adding easyconfigs: OpenCV-3.1.0-intel-2016b.eb · f9564f62
  Kenneth Hoste authored Nov 22, 2016
  
  f9564f62
- Merge pull request #3836 from verdurin/20161120220141_new_pr_FASTX-Toolkit0014 · 0a94c834
  Kenneth Hoste authored Nov 22, 2016
```
{bio,lib}[foss/2016b] FASTX-Toolkit v0.0.14, libgtextutils v0.7
```
  0a94c834
- Merge pull request #3849 from boegel/20161122111246_new_pr_XGBoost06a2 · 2f4d9721
  Kenneth Hoste authored Nov 22, 2016
```
{lib}[intel/2016b] XGBoost v0.6a2, XGBoost v0.6a2
```
  2f4d9721
- Merge pull request #3835 from verdurin/20161120215741_new_pr_Exonerate240 · a914db43
  Kenneth Hoste authored Nov 22, 2016
```
{bio}[foss/2016b] Exonerate v2.4.0
```
  a914db43
- Merge pull request #3833 from verdurin/20161120212808_new_pr_ClustalW221 · aae334b1
  Kenneth Hoste authored Nov 22, 2016
```
{bio}[foss/2016b] ClustalW2 v2.1
```
  aae334b1
- Merge pull request #3838 from verdurin/20161120231357_new_pr_khmer141 · f64973f5
  Kenneth Hoste authored Nov 22, 2016
```
{bio}[foss/2016b] khmer v1.4.1
```
  f64973f5
- Merge pull request #3842 from verdurin/20161121075433_new_pr_seqtk12 · 7790667d
  Kenneth Hoste authored Nov 22, 2016
```
{bio}[foss/2016b] seqtk v1.2
```
  7790667d
- Merge pull request #3840 from verdurin/20161120234036_new_pr_picard211 · dc27c19d
  Kenneth Hoste authored Nov 22, 2016
```
{bio}[dummy/] picard v2.1.1
```
  dc27c19d
- Merge pull request #3841 from verdurin/20161121074051_new_pr_GSL21 · 380ab129
  Kenneth Hoste authored Nov 22, 2016
```
{numlib}[foss/2016b] GSL v2.1
```
  380ab129
- Merge pull request #3844 from verdurin/20161121111947_new_pr_Biopython168 · 2c0e598e
  Kenneth Hoste authored Nov 22, 2016
```
{bio}[foss/2016b] Biopython v1.68
```
  2c0e598e
- Merge pull request #3845 from verdurin/20161121114319_new_pr_SAMtools0119 · 216660e0
  Kenneth Hoste authored Nov 22, 2016
```
{bio}[foss/2016b] SAMtools v0.1.19
```
  216660e0
- adding easyconfigs: XGBoost-0.6a2-intel-2016b-Python-2.7.12.eb,... · 9b462dd3
  Kenneth Hoste authored Nov 22, 2016
```
adding easyconfigs: XGBoost-0.6a2-intel-2016b-Python-2.7.12.eb, XGBoost-0.6a2-intel-2016b-Python-3.5.2.eb
```
  9b462dd3
21 Nov, 2016 - 8 commits
- adding easyconfigs: SAMtools-0.1.19-foss-2016b.eb · c44e603e
  Adam Huffman authored Nov 21, 2016
  
  c44e603e
- adding easyconfigs: Biopython-1.68-foss-2016b-Python-2.7.12.eb · 7fb51031
  Adam Huffman authored Nov 21, 2016
  
  7fb51031
- adding easyconfigs: Oases-0.2.08-foss-2016b.eb · 3d155e5b
  Adam Huffman authored Nov 21, 2016
  
  3d155e5b
- adding easyconfigs: seqtk-1.2-foss-2016b.eb · 6ae0c365
  Adam Huffman authored Nov 21, 2016
  
  6ae0c365
- adding easyconfigs: GSL-2.1-foss-2016b.eb · ebf2419c
  Adam Huffman authored Nov 21, 2016
  
  ebf2419c
- adding easyconfigs: picard-2.1.1-Java-1.8.0_112.eb · 256c1628
  Adam Huffman authored Nov 21, 2016
  
  256c1628
- adding easyconfigs: MAFFT-7.305-foss-2016b-with-extensions.eb · 8169eaea
  Adam Huffman authored Nov 21, 2016
  
  8169eaea
- adding easyconfigs: khmer-1.4.1-foss-2016b-Python-2.7.12.eb · b478a601
  Adam Huffman authored Nov 21, 2016
  
  b478a601
20 Nov, 2016 - 7 commits
- adding easyconfigs: GMAP-GSNAP-2016-11-07-foss-2016b.eb · bdf53da4
  Adam Huffman authored Nov 20, 2016
  
  bdf53da4
- adding easyconfigs: FASTX-Toolkit-0.0.14-foss-2016b.eb, libgtextutils-0.7-foss-2016b.eb · 01715ae2
  Adam Huffman authored Nov 20, 2016
  
  01715ae2
- Add missing deps for Exonerate · 0f27dfbf
  Adam Huffman authored Nov 20, 2016
  
  0f27dfbf
- adding easyconfigs: Exonerate-2.4.0-foss-2016b.eb · 68748024
  Adam Huffman authored Nov 20, 2016
  
  68748024
- adding easyconfigs: ClustalW2-2.1-foss-2016b.eb · 8c343751
  Adam Huffman authored Nov 20, 2016
  
  8c343751
- Merge pull request #3830 from verdurin/20161118173049_new_pr_HTSlib131 · 3f4664ae
  Kenneth Hoste authored Nov 20, 2016
```
{bio}[foss/2016b,intel/2016b] HTSlib v1.3.1, HTSlib v1.3.1
```
  3f4664ae
- Remove inconsistencies between foss and intel versions · d9a7d369
  Adam Huffman authored Nov 20, 2016
  
  d9a7d369
18 Nov, 2016 - 1 commit
- adding easyconfigs: HTSlib-1.3.1-foss-2016b.eb, HTSlib-1.3.1-intel-2016b.eb · 1d7580ef
  Adam Huffman authored Nov 18, 2016
  
  1d7580ef
17 Nov, 2016 - 6 commits
- Merge pull request #3826 from boegel/20161117213321_new_pr_graphviz051 · 61fc401f
  Kenneth Hoste authored Nov 17, 2016
```
{vis}[intel/2016b] graphviz v0.5.1 (Python bindings)
```
  61fc401f
- also add graphviz easyconfig using Python 3.5.2 · b9e49c50
  Kenneth Hoste authored Nov 17, 2016
  
  b9e49c50
- adding easyconfigs: graphviz-0.5.1-intel-2016b-Python-2.7.12.eb · dc6612e3
  Kenneth Hoste authored Nov 17, 2016
  
  dc6612e3
- Merge pull request #3822 from boegel/20161117151028_new_pr_Pillow342 · 417ee10a
  Kenneth Hoste authored Nov 17, 2016
```
{vis}[intel/2016b] Pillow v3.4.2 w/ freetype 2.6.5
```
  417ee10a
- Merge pull request #3820 from boegel/20161117135702_new_pr_Graphviz2380 · d876a17f
  Kenneth Hoste authored Nov 17, 2016
```
{vis}[intel/2016b] Graphviz v2.38.0
```
  d876a17f
- adding easyconfigs: Pillow-3.4.2-intel-2016b-Python-3.5.2-freetype-2.6.5.eb · 193b070a
  Kenneth Hoste authored Nov 17, 2016
  
  193b070a