Commits · e1b83120c8d9ac9a9753f21956a8e66d731a0242 · Computational Earth Sciences / easybuild-easyconfigs · GitLab

09 Mar, 2017 7 commits
- miRDeep2 scripts do a hard check for an (empty) file named... · e1b83120
  Kenneth Hoste authored Mar 09, 2017
```
miRDeep2 scripts do a hard check for an (empty) file named 'install_successful' in the install dir...
```
  e1b83120
- Merge pull request #4288 from migueldiascosta/20170309122733_new_pr_magma200 · e316d84a
  Kenneth Hoste authored Mar 09, 2017
```
yet another batch of minor style fixes (m)
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  e316d84a
- Merge pull request #4287 from migueldiascosta/20170309122539_new_pr_LevelDB118 · dc18fc41
  Kenneth Hoste authored Mar 09, 2017
```
yet another batch of minor style fixes (l)
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  dc18fc41
- Merge pull request #4286 from migueldiascosta/20170309120721_new_pr_jModelTest2110r20160303 · 450169e1
  Kenneth Hoste authored Mar 09, 2017
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yet another batch of minor style fixes (j)
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  450169e1
- yet another batch of minor style fixes · 204a49a7
  Miguel Dias Costa authored Mar 09, 2017
  
  204a49a7
- yet another batch of minor style fixes · 86c6bb0e
  Miguel Dias Costa authored Mar 09, 2017
  
  86c6bb0e
- yet another batch of minor style fixes · 1dbcd246
  Miguel Dias Costa authored Mar 09, 2017
  
  1dbcd246
08 Mar, 2017 33 commits
- Merge pull request #4285 from boegel/20170308180708_new_pr_STAR252b · 84f2dda6
  Kenneth Hoste authored Mar 08, 2017
```
{bio}[intel/2016b] STAR v2.5.2b
```
  84f2dda6
- adding easyconfigs: STAR-2.5.2b-intel-2016b.eb · 2f20fd4e
  Kenneth Hoste authored Mar 08, 2017
  
  2f20fd4e
- Merge pull request #4283 from boegel/20170308160211_new_pr_BLAT35 · 2a571fed
  Kenneth Hoste authored Mar 08, 2017
```
{bio}[intel/2016b] BLAT v3.5
```
  2a571fed
- Merge pull request #4282 from boegel/20170308154054_new_pr_L_RNA_scaffolder20141124 · 9c2685af
  Kenneth Hoste authored Mar 08, 2017
```
{bio}[intel/2016b] L_RNA_scaffolder v20141124
```
  9c2685af
- Merge pull request #4281 from boegel/20170308151815_new_pr_DBG2OLC20170208 · 5b8617a9
  Kenneth Hoste authored Mar 08, 2017
```
{bio}[intel/2016b] DBG2OLC v20170208
```
  5b8617a9
- adding easyconfigs: BLAT-3.5-intel-2016b.eb · a9d2e2ae
  Kenneth Hoste authored Mar 08, 2017
  
  a9d2e2ae
- also include $LDFLAGS in compilation command · d789421e
  Kenneth Hoste authored Mar 08, 2017
  
  d789421e
- adding easyconfigs: L_RNA_scaffolder-20141124-intel-2016b-Perl-5.24.0.eb · a3c162e9
  Kenneth Hoste authored Mar 08, 2017
  
  a3c162e9
- Merge pull request #4280 from boegel/20170308142657_new_pr_fqtrim094 · edab0065
  Kenneth Hoste authored Mar 08, 2017
```
{bio}[intel/2016b] fqtrim v0.9.4
```
  edab0065
- adding easyconfigs: DBG2OLC-20170208-intel-2016b.eb · 2fa39e0e
  Kenneth Hoste authored Mar 08, 2017
  
  2fa39e0e
- no need to include $CXXFLAGS into LDFLAGS, thanks @wpoely86 · ff7cd40c
  Kenneth Hoste authored Mar 08, 2017
  
  ff7cd40c
- Merge pull request #4278 from pescobar/blasr-hdf5-fix · 207ea97b
  Kenneth Hoste authored Mar 08, 2017
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fix to be sure the HDF5 provided by easybuild is used
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  207ea97b
- adding easyconfigs: fqtrim-0.9.4-intel-2016b.eb · 30861069
  Kenneth Hoste authored Mar 08, 2017
  
  30861069
- Merge pull request #4279 from migueldiascosta/20170308182605_new_pr_icc111073 · e6262e6e
  Kenneth Hoste authored Mar 08, 2017
```
yet another batch of minor style fixes (i)
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  e6262e6e
- Merge pull request #4277 from migueldiascosta/20170308173721_new_pr_h5py201 · 80cd2165
  Kenneth Hoste authored Mar 08, 2017
```
yet another batch of minor style fixes (h)
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  80cd2165
- Merge pull request #4276 from hpcuantwerpen/correct-libjpeg-turbo-references · 6526b8d1
  Kenneth Hoste authored Mar 08, 2017
```
Correct libjpeg turbo references
```
  6526b8d1
- Merge pull request #4270 from migueldiascosta/20170308145907_new_pr_DB6223 · 45bcb897
  Kenneth Hoste authored Mar 08, 2017
```
yet another batch of minor style fixes (d)
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  45bcb897
- Merge pull request #4275 from migueldiascosta/20170308164509_new_pr_GATK330 · f0b0c973
  Kenneth Hoste authored Mar 08, 2017
```
yet another batch of minor style fixes (g)
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  f0b0c973
- yet another batch of minor style fixes · 2968917c
  Miguel Dias Costa authored Mar 08, 2017
  
  2968917c
- yet another style fix · 515b3bd2
  Miguel Dias Costa authored Mar 08, 2017
  
  515b3bd2
- fix to be sure the HDF5 provided by easybuild is used · 64e7a372
  Pablo Escobar authored Mar 08, 2017
  
  64e7a372
- Merge pull request #4271 from migueldiascosta/20170308150637_new_pr_EIGENSOFT611 · 9b9bc8b0
  Kenneth Hoste authored Mar 08, 2017
```
yet another batch of minor style fixes (e)
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  9b9bc8b0
- yet another style fix · e67ec58c
  Miguel Dias Costa authored Mar 08, 2017
  
  e67ec58c
- yet another style fix · 8dba00cb
  Miguel Dias Costa authored Mar 08, 2017
  
  8dba00cb
- yet another batch of minor style fixes · 52d92126
  Miguel Dias Costa authored Mar 08, 2017
  
  52d92126
- yet another style fix · f2188cf1
  Miguel Dias Costa authored Mar 08, 2017
  
  f2188cf1
- Correction: EBROOTLIGJPEGTURBO -> EBROOTLIBJPEGMINTURBO · f0ad795a
  HPC core facility CalcUA authored Mar 08, 2017
  
  f0ad795a
- yet another style fix · c3c6264e
  Miguel Dias Costa authored Mar 08, 2017
  
  c3c6264e
- Merge pull request #4257 from boegel/20170306113907_new_pr_SPAdes3101 · 95d116ee
  Kenneth Hoste authored Mar 08, 2017
```
{bio}[foss/2016b] SPAdes v3.10.1
```
  95d116ee
- yet another style fix · 068f2709
  Miguel Dias Costa authored Mar 08, 2017
  
  068f2709
- Merge pull request #4274 from migueldiascosta/20170308161549_new_pr_FASTA3635e · 793d6342
  Kenneth Hoste authored Mar 08, 2017
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yet another batch of minor style fixes (f)
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  793d6342
- yet another batch of minor style fixes · fc730077
  Miguel Dias Costa authored Mar 08, 2017
  
  fc730077
- revert back to using shipped Boost for SPAdes 3.10.1, since Boost version difference is too big · 16127fff
  Kenneth Hoste authored Mar 08, 2017
  
  16127fff