{bio}[dummy/dummy] GATK v3.7

{vis}[intel/2016b] PyQt5 v5.7.1, PyQt v4.12, SIP v4.19

adding easyconfigs: PyQt5-5.7.1-intel-2016b-Python-2.7.12.eb, PyQt-4.12-intel-2016b-Python-2.7.12.eb, SIP-4.19-intel-2016b-Python-2.7.12.eb

{lang}[dummy/dummy] Anaconda2 v4.2.0, Anaconda3 v4.2.0

{data}[intel/2016b] GDAL v2.1.2

{bio,lib}[foss/2016b] EMBOSS v6.6.0, libharu v2.3.0

{vis}[dummy/] GroIMP v1.5

{lib}[foss/2015a] Xerces-C++ 3.1.3 (REVIEW)

muParser

{devel}[intel/2016b] Qt5 v5.7.1

fix permissions on SWASH binaries

{lib,math}[intel/2016b] libspatialite v4.3.0a, GEOS v3.6.1

{data}[intel/2016b] netCDF v4.4.1.1

{vis}[intel/2016b] matplotlib v1.4.3

added CD-HIT 4.6.6

{devel}[foss/2016b] Yade 2016.06a (REVIEW)

{vis}[intel/2016b] hyperspy v1.1.1

changed source_url to archive subdirectory
files there have no versionsuffix which prevents the use of
--try-software-version

Use VTK 6.3.0 and remove patch line for intel toolchain at Qt5 easyconfig with foss toolchain and include bzip2 as dependency in yade easyconfig

added easyconfig for PEAR 0.9.8

update FFTW 3.3.5 easyconfigs to use FFTW easyblock & enable running of tests

{vis}[intel/2016b] mahotas v1.4.3

starting from this version there is no -src suffix for the source files