{lang} [goolf 1.4.10] Cython-0.22-Python-2.7.3 (REVIEW)

{bio} [goolf 1.4.10] Cufflinks 2.2.1 (REVIEW)

{bio} [goolf 1.4.10] BEDTools 2.23.0 (REVIEW)

{bio} [goolf 1.4.10] ABySS-1.5.2-goolf-1.4.10 (REVIEW)

Contributing pBWA

style fixes in pBWA easyconfig

Add hanythingondemand eb files. 2.2.[234]

These could otherwise have been installed w/ --try-software-version

{compiler}[dummy] GCC 4.5.2 and 4.6.0 (REVIEW)

{phys}[intel/2015a] Geant4 10.01.p01 (REVIEW)

{lang}[foss/2015a] Python 2.7.10 (REVIEW)

{lang}[intel/2015a] Python 2.7.10 (REVIEW)

add fpp + deps as R extensions

{lang} [GCC/4.9.2] Clang 3.6.1 (REVIEW)

fix GMP 6.0.0a with GCC/4.9.2

{bio}[dummy] fastqc 0.11.2 + 0.11.3