HERMESv3_GR FAILED: 20170607
HERMESv3_GR fails to finish successfully for date 20170607 of a global run, something with GFAS:
File "/gpfs/scratch/pr1enx00/pr1enx04/a443/HERMESv3/sources/HERMESv3_GR/hermesv3_gr/modules/emision_inventories/point_gfas_emission_inventory.py", line 279, in do_regrid
aux = netcdf.variables[pollutant['name']][:].flatten()[gdf['src_index']]
File "/apps/PYTHON/3.7.4_ES/INTEL/lib/python3.7/site-packages/numpy/ma/core.py", line 3172, in __getitem__
dout = self.data[indx]
File "/apps/PYTHON/3.7.4_ES/INTEL/lib/python3.7/site-packages/pandas/core/series.py", line 1068, in __getitem__
result = self.index.get_value(self, key)
File "/apps/PYTHON/3.7.4_ES/INTEL/lib/python3.7/site-packages/pandas/core/indexes/base.py", line 4730, in get_value
return self._engine.get_value(s, k, tz=getattr(series.dtype, "tz", None))
File "pandas/_libs/index.pyx", line 80, in pandas._libs.index.IndexEngine.get_value
File "pandas/_libs/index.pyx", line 88, in pandas._libs.index.IndexEngine.get_value
File "pandas/_libs/index.pyx", line 126, in pandas._libs.index.IndexEngine.get_loc
File "pandas/_libs/index.pyx", line 152, in pandas._libs.index.IndexEngine._get_loc_duplicates
File "pandas/_libs/index_class_helper.pxi", line 122, in pandas._libs.index.Int64Engine._maybe_get_bool_indexer
KeyError: 1
Could be something with GFAS input file?
This is not the only date I've noticed that hermes fails no matter retrials done. This specific failure is produced in a443 experiment a443_20170601_000_7_HERMESv3_GR.