[data-coupler-co2box] change transformation in namcouple generator when source...

See merge request !8

add support for co2box data coupler (no AMIP) using the new yaml interface

See merge request !6

# Conflicts:
#   tests/data/convert-ece4pyreader-grids.sh
#   tests/data/template_conf_datacoupler_forcing.yaml
#   tests/launch_ece3_data_coupler_mn4.cmd

[data-coupler-co2box] change transformation in namcouple generator when source and target grids are the same (e.g. GLOBAL for the co2box model)

Both DataCoupler and toyy_model are using the ece3/toy_model.py with a YAML input files. In addition, namcouple file for DataCoupller is generated automatically based on the YAML input. The CO2 E/C-modes are removed.

See merge request !4

Fixing all the issues that were raised in mr4. Also, preparing for future development: co2box & co2flux.

Resolved issue: Eliminating hard-coded MPI process type for partitioning, ensuring non-empty out_coupling_vars, and and no dependency on  MPI num_processes.

both datacoupler and ece3-toy-model are using the same /ece3-toy-model/toy_model.py, plus some clean up

WIP: DataCouplerPreprocessor.py is generating yaml_conf_ifs_toy_model.yaml that will be used be ifs_toy_model

WIP: cam couple is produced by the preprocessing script in a cleaner and more straightforward manner, prep work to remove type from YAMLUtils

Unifying execution of toy_model and datacoupler via /test/ directory with automated directory preparation and time stamping.

Merge both toy model types into a single general toy model with support for both toy model and datacoupler yaml

namcouple is generated by puscript before the call of Toy_model and Datacoupler. problem with commit-id:4208e78c is fixed

namcouple script is generating the namecouple in the style that was discussed (for each variable in a seperate parag.), eventhough it is not working with Oasis, it will follow up in next step

WIP: developing tools that is needed for generating namcouple, they will all move to a single script to generate namcouple before toy_model and datacoupler

WIP: harmonizing the general_toy_model.py with toy_model.py, still needs more adjustment. Extracting functions from DataCoupler to a seperate YAMLb script

replacing the namelist usage in IFS_toy with the YAML_cong file, reintroducing OasisModel var to yaml conf to be used in general toy model

removing model name and replacing  its use with OasisCPLNG, including send/rec-id and send/rec-grid-name in template and necessary changes

including AMIP forcing to YAML support, in addition now yaml file is passed to run_example as argument from batch_script file

Merge branch 'data-coupler' of https://earth.bsc.es/gitlab/es/python-amip-reader into amirpasha_issue_3_replace_namelist_with_yaml

Refactored the script by removing all the legacy functions and hardcoded values related to the namelist. Additionally, modified the generation of the experiment configuration file name, which is now based on the ModelName specified in the template file.

refactoring the yaml reader to be experiment --conf, integarte the AMIPDataCoupler to the DataCoupler itself, introducing model name in yaml

 the sed commond is replaced by executable yaml file, simplyfing the concat of the varieble to template yaml