Newer
Older
Found invalid values in 'lons'.
```
```
ERROR: invalid cell
Aborting in file clipping.c, line 1295 ...
Error in s2dverification::CDORemap(data_array, lons, lats, ...) :
CDO remap failed.
```
When using a new cluster, some errors could happen. Here, there are some behaviours detected from issue #64.
- whether running Compute(), request password:
```
Password:
```
Check that the host name for the cluster has been include in the ´.ssh/config´.
Check also that the passwordless access has been properly set up. You can check that you can access the cluster without providing the password by using the host name ´ssh nord3´ (see more infor in the [**Practical guide**](inst/doc/practical_guide.md)).
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
In this case, the error ´No data files found for any of the specified datasets.´ will be returned.
- repetitive prints of modules loading:
```
load UDUNITS/2.1.24 (PATH)
load NETCDF/4.1.3 (PATH, LD_LIBRARY_PATH, NETCDF)
load R/2.15.2 (PATH, LD_LIBRARY_PATH)
```
The .bashrc in your Nord 3 home must be edit with the information from [BSC ES wiki](https://earth.bsc.es/wiki/doku.php?id=computing:nord3) to load correct modules. However, if you add a line before those, the result will be the one above.
Check your .bashrc to avoid loading modules before define the department ones.
- R versions: Workstation version versus remote cluster version
Some functions depends on the R version used and they should be compatible in workstation and in the remote cluster. If the error:
```
cannot read workspace version 3 written by R 3.6.2; need R 3.5.0 or newer
```
change the R version used in your workstation to one newer.
### 7. Start() fails retrieving data
If you get the following error message:
```
Exploring files... This will take a variable amount of time depending
* on the issued request and the performance of the file server...
Error in R_nc4_open: No such file or directory
Error in file_var_reader(NULL, file_object, NULL, var_to_read, synonims) :
Either 'file_path' or 'file_object' must be provided.
```
check if your path contains the label $var$ in the path. If not, try to added it as part of the path or the file name. Where $var$ is the variable to retrieve from files.