README.md

# Nemo modelfactors

Script used to get important metrics from NEMO

# Installation and requeriments

This script requires Python 3 and relies on
*Extrae*,*Paraver* and *Dimemas* being installed and available
through the PATH environment variable.

* *Extrae* available at https://ftp.tools.bsc.es/extrae/ !!! Install 3.7.1 version !!!
* *Paraver* available at https://tools.bsc.es/paraver
* *Dimemas* available at https://tools.bsc.es/dimemas

If not already done, install both tools and add them to the PATH environment
variable with:

```
export PATH=<extrae-install-dir>/bin:$PATH
export EXTRAE_HOME=<extrae-install-dir>
export PATH=<paraver-install-dir>/bin:$PATH
export PARAVER_HOME=<paraver-install-dir>
export PATH=<dimemas-install-dir>/bin:$PATH
export DIMEMAS_HOME=<dimemas-install-dir>

```
Also the different modules needed to compile and execute NEMO should be loaded before the script execution.

* subversion (svn) for version control of XIOS sources
* git for version control of NEMO sources
* Perl interpreter
* Fortran compiler (ifort, gfortran, pgfortran, ftn, …),
* Message Passing Interface (MPI) implementation (e.g. OpenMPI or MPICH).
* Network Common Data Form (NetCDF) library with its underlying Hierarchical Data Form (HDF)

Additionally, plotting relies on the according SciPy(>= 0.17.0),
NumPy, pandas, searborn and matplotlib (>= 3.x) modules for Python 3.
Furthermore, the gnuplot output requires gnuplot version 5.0 or higher.

# Usage

Copy all the content of this folder into the folder used to run NEMO, the one that contains the data the namelist and the executable.
Edit the file config.yaml adding the information required.
Execute script.sh 
'''
./script.sh
'''