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  • autosubmitautosubmit
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  • #1313
Closed
Open
Issue created May 31, 2024 by Andreas Baer@abaerDeveloper

Python jobs on PS platform: executable issues

Hello @dbeltran and @bdepaula,

Autosubmit Version

4.1.x (tested .5 and .6)

Which task has issues?

autosubmit run

Summary

When a task is run with type python on a PS platform, it is executed with the command nohup python <filename>, which can easily break due to not finding the correct executable. This is also the case, if an executable is supplied with the EXECUTABLE field.

Steps to reproduce

  • autosubmit expid -dm -H <PSARCH> -d "Test exp for python bug report".
  • Add TYPE: python to one job, e.g. INI.
  • OPTIONAL: Add EXECUTABLE: /path/to/my/python3 to the job
  • autosubmit create <expid>
  • autosubmit run <expid>

What is the current bug behavior?

The job INI fails with the error nohup: failed to run command 'python': No such file or directory.

What is the expected correct behavior?

It should use python3 or the provided executable to run the job.

Relevant logs and/or screenshots

Autosubmit log report (full_log.txt):

2024-05-31 14:20:49,895 Submitting job with the command: timeout 18000 nohup python /work/bb1215/b382013/a01f/LOG_a01f/a01f_20000101_fc0_INI.cmd > /work/bb1215/b382013/a01f/LOG_a01f/a01f_20000101_fc0_INI.cmd.out.0 2> /work/bb1215/b382013/a01f/LOG_a01f/a01f_20000101_fc0_INI.cmd.err.0 & echo $!

Any other relevant information

The relevant code part is here:
https://earth.bsc.es/gitlab/es/autosubmit/-/blob/master/autosubmit/platforms/paramiko_platform.py#L1187

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